<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33569

Description Uncharacterized protein
SequenceMAAVPHSVSLFPLEPDTGLCESQGPLHAICRLPLIPSLGLIAATNQVAGPIHKFALCPQSSTHYRVVFHNAYCLDIHCKGKNTVAVRDGAFSLFDMRKVVEGLYTVPNLKAFLELFIDETVSYHHQHRNSRTLPANEDDGNPISPMNIDAGPTPPDPYLPTQVSGYPSGASPMSRAGLGQGGSGGFAYPMTPPTAPGGPGSSNPATPASPHTSVLSQQQHYAMSPGAYPLASPPSIPGPSPSAVMKGTPSPGLVEGGSPFTSSMGLTMPSPGSRQWPGSPSMPGPSPVQRFGMAQSPGGSMGPSTHSPGSSGMTGQQGQVGE
Length322
PositionTail
OrganismStrongylocentrotus purpuratus (Purple sea urchin)
KingdomMetazoa
Lineage
Aromaticity0.06
Grand average of hydropathy-0.279
Instability index65.00
Isoelectric point6.62
Molecular weight33195.08
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33569
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.38|      15|      19|       5|      19|       2
---------------------------------------------------------------------------
    5-   19 (29.18/17.06)	P.HSVSLFPLEPDTGL
   25-   40 (25.20/13.74)	PlHAICRLPLIPSLGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     154.35|      37|      37|     188|     224|       4
---------------------------------------------------------------------------
  188-  218 (54.93/19.26)	.........YPM.TPPTAPG.GPGSSNPATP.......ASPHTSVLSQQ
  219-  267 (48.41/16.07)	QHYAMSpgaYPLaSPPSIPGpSPSAVMKGTPspglvegGSPFTSSMGLT
  289-  316 (51.02/17.35)	QRFGMA.............Q.SPGGSMGPST.......HSPGSSGMTGQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.64|      19|      19|      66|      84|       5
---------------------------------------------------------------------------
   65-   83 (36.61/21.87)	RVVFHNAYCL.DIH..CKGKNT
   84-  105 (22.02/10.90)	VAVRDGAFSLfDMRkvVEGLYT
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33569 with Med14 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QHRNSRTLPANEDDGNPISPMNIDAGPTPPDPYLPTQVSGYPSGASPMSRAGLGQGGSGGFAYPMTPPTAPGGPGSSNPATPASPHTSVLSQQQHYAMSPGAYPLASPPSIPGPSPSAVMKGTPSPGLVEGGSPFTSSMGLTMPSPGSRQWPGSPSMPGPSPVQRFGMAQSPGGSMGPSTHSPGSSGMTGQQGQVGE
126
322










Molecular Recognition Features






MoRF SequenceStartStop




NANANA