<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33554

Description Uncharacterized protein
SequenceMAGHVEGSPSLLYIPVVKPCSEDEQLMVSVDMQTGSYIPSIAHCGSTLLDEIDQGLNHERSKLEPLIAKLRVLLYMRHCQYSVSMLPVTFLKELPLVTVSPEHPVNRLLPNYIYLRLTQHPQYYVVVDFALGKGLGDFLCRYHLMRCSSASYIDAQTIPQGGAAPSAQKDTPETTEKYLHPDVFVDLDHSTILRGPDTSVEDLDVDDDEKKRKVHHITAGEHKRKKLTSYCEFFNYTLSHVVSLCNIRIPFIKLCEELSQNNLAHQGIQVEGEGVGLVIKLCSLPPCKGVAKETSMALNAALLDCSFRLHKNQHGMWQVQMVFANCPVTSCSSREQGSTRLVYLFYKVLGSHSVVKQFQRDWDSIGRLYHLTLDLPIWLPYLTLSHSSRSSLIQDNPPFTTLVDIQSFTYQKITIAYGKDRSSTVMVCWDPDILRFRLIFSAVGSTSTANCHTMVQSYLEHELNEEQSLPKLIKSLCESQGPLHAICRLPLIPSLGLIAATNQVAGPIHKFALCPQSSTHYRVVFHNAYCLDIHCKGKNTVAVRDGAFSLFDMRKVVEGLYTVPNLKAFLELFIDETVSYHHQHRNSRTLPANEDDGNPISPMNIDAGPTPPDPYLPTQVSGYPSGASPMSRAGLGQGGSGGFAYPMTPPTAPGGPGSSNPATPASPHTSVLSQQQHYAMSPGAYPLASPPSIPGPSPSAVMKGTPSPGLVEGGSPFTSSMGLTMPSPGSRQWPGSPSMPGPSPVQRFGMAQSPGGSMGPSTHSPGSSGMTGQQGQVVPRQTRVLPPRNLATSLPTILSHEALHRMFTPAAIHGTPTTPLTYLCAPIERFLGSTYLQRHLKRVINAEQTQTLQAAEQGCRLKLTLLPPSDQGFHFKNDSLIFRVWLNPAHMQQLHLQVKQTPDAKERWSPDELHVIELYYENKVACPPFKPKAITSFARMLCAMPGVFKDLIQLMHLELQPDPSLKWSMQLCLTVPQGQTFAPVGIPAVVIKTKMLLFIQLSRQDTAPMVGQEAPSVIVPVLYDMQANTTQHISAIKPSVPTSQNDGTIATMLRRWAEFPNSAECTLFPAIRDLMANLNLPM
Length1082
PositionTail
OrganismStrongylocentrotus purpuratus (Purple sea urchin)
KingdomMetazoa
Lineage
Aromaticity0.07
Grand average of hydropathy-0.173
Instability index50.85
Isoelectric point7.59
Molecular weight119041.61
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33554
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     100.46|      20|      21|     621|     640|       2
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  621-  639 (32.19/13.56)	.......SG...YPSGASPMSRAGLGQGG
  640-  658 (24.44/ 8.39)	.......SGgfaYP..MTPPTAPG.GPGS
  659-  683 (21.61/ 6.50)	SnpatpaSP...HTSVLSQQQHYAMSPG.
  757-  767 (22.22/ 6.91)	S...............MGPSTH...SPGS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.61|      10|      21|     689|     698|       3
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  689-  698 (21.83/10.57)	SPPSIPGPSP
  707-  716 (17.78/ 6.88)	SPGLVEGGSP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.15|      17|      22|     472|     493|       4
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  472-  490 (28.81/22.32)	LIKSLCESQGPLH..AICrlP
  497-  515 (27.33/ 8.42)	LIAATNQVAGPIHkfALC..P
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.91|      16|      21|     861|     876|       6
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  861-  876 (28.31/16.57)	LKLTLLPPSDQGFHFK
  882-  897 (30.60/18.54)	FRVWLNPAHMQQLHLQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.39|      21|      21|     531|     551|       7
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  531-  551 (35.75/27.06)	LDIHCKGKNTVAVRDGAFSLF
  553-  573 (34.64/25.96)	MRKVVEGLYTVPNLKAFLELF
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.15|      21|      23|     288|     308|       8
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  285-  307 (29.30/18.26)	P...pcKGVAKETSMALNAALLDCSF
  308-  333 (34.84/23.17)	RlhknqHGMWQVQMVFANCPVTSCSS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.14|      11|      23|     172|     182|      10
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  172-  182 (21.07/14.58)	PETTEKYLHPD
  196-  206 (19.06/12.41)	PDTSVEDLDVD
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.57|      13|      23|     783|     796|      11
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  783-  796 (18.87/13.84)	RVLPPRNLATSlPT
  805-  817 (24.71/13.77)	RMFTPAAIHGT.PT
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.78|      10|      23|     231|     240|      12
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  231-  240 (20.40/12.27)	C.EFFNYTLSH
  255-  265 (14.38/ 6.70)	CeELSQNNLAH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33554 with Med14 domain of Kingdom Metazoa
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