<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33540

Description Uncharacterized protein
SequenceMDYEFKQQTSGVRESVEDLFDFEGCKVGRGTYGHVYKATTKKEPKKEYALKQIEGTGISMSACREVALLRELRHPNVICLRRVFLSHSDRKVYLLCDFSEHDLWHIIKYHRANKASKKGPTSVPPVMVKSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGSERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQVPPVMVKSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGSERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQEKDWEDIKKMPEHGNLMKDFRRSNYASCCLPKYMEKHKVPKDSKAFQLLSKLLTMDPTKRMTSEQAMEDQYFKEQPQHTADVFDGKPIPYPKREFLTDDDNDDKSDNNKKSSSSRNSSHMVDARRQRVATSMAGSTSQQGSVGGTRTGGSSSHAQGAKRLRVATTNSSSHGGAQAGIMPQEYQQQQRMSGYQGANTTQGQSQNNKPQQGMMYSSSGSHHSNKMQHGQHHHHQQQQQQQQQQQHHQQHHQQQQQHQQQQQQQQQQHHQGHNQNQPRHY
Length681
PositionKinase
OrganismStrongylocentrotus purpuratus (Purple sea urchin)
KingdomMetazoa
Lineage
Aromaticity0.08
Grand average of hydropathy-0.781
Instability index53.14
Isoelectric point9.04
Molecular weight78257.58
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33540
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     100.70|      17|      69|     125|     141|       1
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  125-  141 (35.84/22.93)	PVMVKSLLYQ....ILDGIHY
  266-  282 (35.84/22.93)	PVMVKSLLYQ....ILDGIHY
  333-  352 (29.03/17.25)	PVVV.TFWYRapelLLGARHY
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     445.29|     106|     138|     142|     263|       2
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  142-  263 (222.64/184.00)	LHSNWVLHRDLKPANILVMGEGSERGRVKIADMGFARLFNSPLKPLADLDpvvvtfwyrAPELllgarhyTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQ
  283-  404 (222.64/150.27)	LHSNWVLHRDLKPANILVMGEGSERGRVKIADMGFARLFNSPLKPLADLDpvvvtfwyrAPELllgarhyTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.56|      16|      16|     631|     646|       3
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  635-  652 (31.53/12.98)	HQQQQQQQQQQ......QhhQQHH
  658-  679 (27.03/10.21)	HQQQQQQQQQQhhqghnQ..NQPR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.92|      14|      15|     551|     564|       4
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  551-  564 (23.44/10.95)	TGGSSSHAQGAKRL
  601-  614 (22.48/10.17)	TQGQSQNNKPQQGM
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.83|      25|      48|     520|     548|       5
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  520-  548 (38.18/39.92)	NSSHMVDARrqrvATSMAGSTSQQGSVGG
  570-  594 (46.65/35.86)	NSSSHGGAQ....AGIMPQEYQQQQRMSG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33540 with Med30 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PTKRMTSEQAMEDQYFKEQPQHTADVFDGKPIPYPKREFLTDDDNDDKSDNNKKSSSSRNSSHMVDARRQRVATSMAGSTSQQGSVGGTRTGGSSSHAQGAKRLRVATTNSSSHGGAQAGIMPQEYQQQQRMSGYQGANTTQGQSQNNKPQQGMMYSSSGSHHSNKMQHGQHHHHQQQQQQQQQQQHHQQHHQQQQQHQQQQQQQQQQHHQGHNQNQPRHY
461
681










Molecular Recognition Features






MoRF SequenceStartStop




1) GAKRLRVATT
2) IMPQEY
3) IPYPKREF
4) NKMQHGQHHHHQQQ
5) QQQHHQQHHQQQQQHQQQQQQQQQQHHQGHNQNQPRHY
560
581
492
625
644
569
586
499
638
681