<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33527
Description |
Mediator of RNA polymerase II transcription subunit 20 (Fragment) |
Sequence | LARWINAPTTGLDLMTENILRNHNGQFRGKWQLGVRTYRSTLNEHKANAPSERTMCALTMSENVFVLIDDPHAPTPADLALESSVIPTNPPHYRNTFLTLSPPGALEQLLTLLHARWIPTRQAASGVAQQRQASGQQLSIEGHIFAIGNDWIVRAGHVILAGGTVKGMLLEAEYLPVPAMRSRSSGDPSEPAQTVELISNLLLSVLPNISEAKIVAVTISDAQWQDVLWDREAEENAAREAEKEPKPTDDIYAVGDDDVSTHRKGDWVGVDRDRRSAYLIIGALKSEGLI |
Length | 290 |
Position | Head |
Organism | Heterobasidion irregulare TC 32-1 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes>
Russulales> Bondarzewiaceae> Heterobasidion>
Heterobasidion annosum species complex.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.283 |
Instability index | 51.30 |
Isoelectric point | 5.40 |
Molecular weight | 31860.61 |
Publications | PubMed=22463738
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364152
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP33527
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 82.64| 27| 106| 111| 150| 1
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121- 150 (36.38/30.82) RQAASGVAqqRQASGQQLSIEgHIFAIGND
231- 257 (46.27/38.60) REAEENAA..REAEKEPKPTD.DIYAVGDD
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