<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33488

Description Uncharacterized protein
SequenceMNPQFPNMNAMGRGMPNNMQMNQMNPAFMNPQMANAMRGQQGMGVQGGMQAQMGMGNAQIHRQIFQNLQSQGPFSGWQATVPMPERANQIRQLVDSLRLVRPPVEPPRAADVAIQFERKAFAQSATKEDYIRECHEKLTRIRDQRVQQMNVNNSVGTNNGSMAGMQGGMPMQNQAMMQQMGQNMTVNQGMGMGTPQQQMQQNMFNQQRPQNMQQNNVMANQGNNAQSNTAQSNTGHKAPEGLSQEDNQTINQRAAELAKSTPKDKMRSIIESMDARLRAGLEAKGVDPIIYYFRMMATREFRRQKDAQMMSQSGQQNQNMQGQTSFSDMGRFQSQQNEALRSQQEGDMVVPASNNQGTIPDHIRLQQQMMANTQRMNQQGPNQAMLERQRQMQIQANKMQQASQIRQQQQGVNQGLAPNQTPQQANAGFNMLNRPVGNNVQDPSPQNSRPPSRVPQQPGMQPGGPQMSLQDQQKREQALAQFPPQLQNILRQKPHTEWGNIIRSFQQNMKRSVSQQAAMNQQQPNQGMGTQSMSGPPSMQQSLSTGGMAQSDMGSNMQGVPQNQAQMNQEMMRQRAMQQQQQQRMQGDQGKQQPQVQPLGPNEMQIMDRAPVPNAILQPIRTSSRAPLPNVQGPFTWIMLKQWAQANPIPGIPMPQLMKWQATQYHTHRNKQQQAQMQQGQPQMMQRPMNQQQPQQSQNQPQPQQQQQQQQMGAPGQQIGGITIPTPADIQRVRAQNPRLQGMSDEDVRRALINKQRQNQQAQINMARQGMHQGQGVQGQPQPMHQSQMTQMQQTQQQSKPPQQQQQSQPPQPQPPRPQSQQAQARPNQQQPVKTPNQSIEGPKAPSAQQQPQQPQAGPPGQVTREQYEAMSPQQKQNWIRMQQRQAIAKKIVVLTGQVQQGLANLPPPNLDDAGRQRLSLKLSADNVKQMLGRIDSFLVAYYDMTKDEAELRKLVEFRTLLFRQYQQKSVQEKTFIPSGNFTINNEKAEEMIAELSAKFQQTAASIPRQGVQGHQLTPENLKQLEAQEQERKKSVGNKSRDVPPAPTSSQPPFSFGGERGHGAPTYAQPGIKQEDLKLPADPKRRKKNPPATPSTTTKTPTGPTPTPPQAKAAPPAPAAKFKCVFNCERQVKGFQTQAELEHHIATAHGMEQVSDPLAFLDASLREAFNLDENMCQIMKLQPQSQPMVKTASNLKTESRVGTPSAMARIPSQSGPMTSAAIKSAQAQQDEEDMWQYSNIKPAQLDDIFGDMEWESVVPATTLELQDQILAKFRETDAWKAQLKQPAETPETNRSKSASPPTAKDAEPKTEEKPEDDFTVDMSGIDGLDLTGLEEYETLGISDSSSPFEMVEKPGDADTKMADGEPPEYDFLRKHGIEPTLPYEQLDENQRQLYDFIMEPMPDDTVQWIDDGDWADLTARPRVTYHSIYP
Length1430
PositionTail
OrganismCyphellophora europaea CBS 101466
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Chaetothyriomycetidae> Chaetothyriales> Cyphellophoraceae> Cyphellophora.
Aromaticity0.04
Grand average of hydropathy-1.033
Instability index61.89
Isoelectric point9.20
Molecular weight160498.70
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33488
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     776.58|     124|     125|     196|     319|       6
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   29-  176 (116.85/26.19)	M..NPQ...MANA..MRGQQGMG......................VQ.G..GMQAQM..G.......MG......NAQIHrQIFQNLQSQGPfsgwqatvpmperANQIRQLVDSL..RLvRPPVEpPRAADVAIQFerkaFAQSATKEdyirechekltrIRDQRVQQM.....nvnnsvG.TNNGS....................................MA.GMQGGMpMQNQAM....
  212-  334 (193.47/48.65)	MQQNNV...MANQ..GNNAQSNT......................AQ.SNTGHKAPE..G.......LSQE...DNQTIN.QRAAELAKSTP.............KDKMRSIIESMDARL.RAGLE.AKGVDPIIYY....FRMMATRE............FRRQKDAQM.MSQS......G.QQNQN......................................mQGQTSF.SDMGRF..QS
  335-  423 (104.72/22.64)	.QQNEA...LRSQ..QEGDMVVP......................AS.NNQG.TIPD..H.....irLQQQmmaNTQRMN.QQGPN........................................................QAMLERQ............RQMQIQANK.MQQA......S.QIRQQ....................................QQ.GVNQGL.APNQTP..Q.
  424-  579 (125.24/28.65)	..QANAgfnMLNRpvGNNVQDPS......................PQnSRPPSRVPQqpGmqpggpqMSLQ...DQQ....KREQALAQFPP...............QLQNIL.....RQ.KPHTE..WG..NIIRS....FQQNMKRS............VSQQ..AAM.NQQ.........QPNQGmgtqsmsgppsmqqslstggmaqsdmgsnmqgvpqnQA.QMNQEM.MRQRAM..QQ
  580-  705 (113.52/25.22)	QQQQRM...QGDQ..GK..QQPQvqplgpnemqimdrapvpnailQP.IRTSSRAPL..P.......NVQG...PFTWIM.LKQWAQANPIP.............GIPMPQLMKWQATQ................YH........................THRNK.......................................qqqaqmqqgqpqmmqrpmnQQ.QPQQSQ..NQPQP..QQ
  706-  794 (122.76/27.92)	QQQQQQ...MGAP..G..............................Q.QIG........G.......I.........TI..........PTP.............ADIQR..VRAQNPRL.Q.GMS.DEDVR..........RALINKQ.............RQNQQAQInMARQ......GmHQGQG....................................VQ.GQPQPM.HQSQMTqmQQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.79|      10|      17|     178|     188|       7
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  178-  188 (17.40/ 8.30)	QQMGQNMtVNQ
  197-  206 (22.39/ 7.75)	QQMQQNM.FNQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     233.01|      45|      45|    1044|    1088|       8
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 1044- 1081 (65.79/32.14)	.........PPA.P.TSSQPPFSF.......GGERG.HG.APT..YAQ........PGIKQ.....EDLKLP..A
 1082- 1107 (29.38/ 9.94)	DPK.RRKKnPPAtPsTTTK.....................TPT..GPT.......................P..T
 1108- 1153 (47.23/20.82)	PPQ.AKAA.PPA.P..AAKFKCVF.......NCERQvKG.FQT..QAElehhiataHGMEQ..............
 1300- 1357 (53.65/24.74)	PPT.AKDA.EP..K.TEEKPEDDFtvdmsgiDGLDL.TG.LEE..YET........LGISDssspfEMVEKPgdA
 1358- 1393 (36.97/14.57)	DTKmADGE.PPE.........YDF.........LRK.HGiEPTlpYEQ........LDENQ.....RQL......
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.52|      13|      15|    1222|    1236|       9
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 1222- 1234 (22.94/ 6.18)	IKSAQAQQDEEDM
 1240- 1252 (22.58/10.02)	IKPAQLDDIFGDM
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.64|      27|      54|     953|     981|      10
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  953-  979 (45.15/20.70)	RKLVEFRTLLFRQYQQ.......KSVQEKTFIPS
  987- 1020 (35.49/16.24)	EKAEEMIAELSAKFQQtaasiprQGVQGHQLTPE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.97|      16|      17|     900|     916|      11
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  900-  916 (25.12/15.12)	QQGLaNLPPPNLDDA.GR
  918-  934 (21.85/ 8.57)	RLSL.KLSADNVKQMlGR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33488 with Med15 domain of Kingdom Fungi
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