<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33469
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MGDFPPPERTSVKASELVHRAVDKSYEDFRTLIHQLPTMREEERREPLLAHLQSSRKRFAQLLAVLKWSVQSPLLQQCDTLLQQTETYRNNVNETNDRLFFMHADLNRAKERRYDLSTAADVLYGGSYLRLPTIIKNAMFPRELPEVDTEQAATEVADIIRFRLIEADIPEQFSNIKLEGGFVTCQAEGEFEIVLTIQGKEKDAKWRVISVNTALTDAQAFEDHSQAASTSALRIIRSNAPNAAHYNHLKNLVQRAMNKSEKPFVDAFMVMREFCSSLALQILASQGKLLMEGRWKNRIMIKHLRDQNILDICYWPKACVRKEAQALTEQQRLIQQLSDPIATARRGSALPYPESSLCVRLGFDPNKKKLLSVSLSPSLPPNLPGYASLLSALEVPSNMFLLSAENLLIAAMRAHVSAALFSIGRLLVVDSPDDKASTQLVSGEDVAMVCSDTSLRIARADIGGLQQFLEVTFDIREGRFIVSSVAAARQSAFYITVKQLERILNTQCKIELGGNVDKSFPNDFALVSGDGKGDKSNELIHTSVRKVLCEIVADEVAQIGSSFKGIEVLRSVNLNWERYLAFRQQHGGQTEDLSISDTALYFQLTSSKESTCYLVIEIDKYGEVDGMNGNVHEAAEAEEYIRLPCFSLLQTSAGLPGQPSGVQFIQRFGAFKKEDLHPSVTRHNEIIGNSLRGNSRKRPYSSNGTSLVGRNMRTTKKALLDGGRVQESTGYWLDDAEHQAVSRNFVPHIASVLLHAINMCSERIQLQHFVNFARRRKSRIRYSGEAGTANREGTGGQVVTLSFPEKVNTDPLKIVAIQGHLKHGGGFELCLQLASPPFKFISPKKPKDHLLSERSHYVNERGQLIFRYPTTMVTSELFSENPLEMFMVELICVVRPLCELAVKLEKMLTAVGRYTNDIKDDGHFYVESADPFAIVLACRAPNPRHCIAAGSSPDGLTTYRVTVQFKQKMGFVVNYSHKAEHPLMHFIQSALNGHSDPAQFVEALERTCVPMGILASVVESQLLCAKYYRQDPPPNAKDGAANGGPKAFGRGKMGGKGMKLGYKFKLPGEEKGYYAEKSIGGDDKSFVPAELVMIPRSQTQVRLSYGDRCAVDIYFLENHSVKMQSSSGGVRVPSCPSEKGIVVDCQNFAEKLRSTLSEMASA |
Length | 1162 |
Position | Tail |
Organism | Phytophthora parasitica (strain INRA-310) |
Kingdom | Oomycetes |
Lineage | Eukaryota> Sar> Stramenopiles> Oomycota> Peronosporales> Peronosporaceae>
Phytophthora.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.278 |
Instability index | 40.38 |
Isoelectric point | 8.35 |
Molecular weight | 129378.42 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP33469
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.07| 13| 23| 134| 146| 1
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134- 146 (23.23/14.59) IIKNAMFPRELPE
159- 171 (21.84/13.28) IIRFRLIEADIPE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 201.12| 65| 298| 32| 105| 2
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32- 105 (104.39/91.57) LIHQLPTMREEERREPLLAHLQSS...RKRF....AQLLAV.LKWSVqSPLLQQCDTLLQQTETYRNnvnetndrLFFMHAD
333- 405 (96.73/64.75) LIQQLSDPIATARRGSALPYPESSlcvRLGFdpnkKKLLSVsLSPSL.PPNLPGYASLLSALEVPSN........MFLLSAE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 162.80| 50| 298| 642| 695| 3
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642- 695 (81.27/67.95) RLP....CFSLLQTSAGLPGQPSGVQFIQRFG...AFKKEDLHPSVtrHneIIGNSLRGNS
939- 995 (81.54/55.23) RAPnprhCIAAGSSPDGLTTYRVTVQFKQKMGfvvNYSHKAEHPLM..H..FIQSALNGHS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 313.56| 107| 297| 412| 526| 4
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412- 526 (156.46/125.03) MRAHvSAALFSIGRllVVDSPD...DKASTQLVSGEDVAMVCSDT..SLRIARADIgGLQQFleVTF.DIREGRFIVSSVA..AARQ..SAFYITVKQLERILNTQCKI.ELGGNVDKSfpNDFAL
712- 829 (157.10/99.55) MRTT.KKALLDGGR..VQESTGywlDDAEHQAVSRNFVPHIASVLlhAINMCSERI.QLQHF..VNFaRRRKSRIRYSGEAgtANREgtGGQVVTLSFPEKVNTDPLKIvAIQGHLKHG..GGFEL
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