<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33426

Description Uncharacterized protein
SequenceMHPISDVAEDVANAYKEQVAAQTKELLLPFQCFCSRRGLHCKEVVLDDVDVPKAIVDYIMNQSVDKLVLGASSRNALTRTFKQPDVPTCVSKTAPEFCTVYVIAKGKISSIRPAPRPNKHPINRQPSNKFEGNENHSFQSTKSEPDFRQNHVDDTVKSPFARSARMGISFERIPVTGGRAYENRMNERIHPASQYGSYPGPGPGPGPGHHDVPYHSMSPGQSNSDWAGVSLRDHLEGGRPLRLPNSHGYNGDQSSEDQMRSFESLRSGGAYWSNGSGSSGHEQSPVSQENNSAQWSMQSVEDVNAEVRRLRLELKQTMEMYNTAYKEAVNANAKDKEILTWKMEEEKKIEKARKAEEAALEVAAKEKQRCQVLLDAAEAAKKMAELEASKRTSAEKTSKTEDQDWEVDVRYRKYTIEEIVKVTENFNASLKIGEGGYGPVYKATLDHTLVAIKILRPDAAQGRKQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRRANTPTLSWQLRFKIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDHNFVSKISDVGLARLVPPSVADSVTQYRMTAAAGTFCYIDPEYQKTGMLGIKSDVYALGIILLQLISSKPPMGLAHNMERSMEKGSFGEMLDPTVKDWPMEDTMKFARLALRCAELRRKDRPDLGGVVLPELCRLRTLADEKMPQMGLYFHHTHAMSYQEVINVPSTGESGFLNDNTKSNSSASGLQW
Length745
PositionTail
OrganismAmborella trichopoda
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Amborellales> Amborellaceae> Amborella.
Aromaticity0.07
Grand average of hydropathy-0.547
Instability index46.03
Isoelectric point6.74
Molecular weight83173.36
Publications
PubMed=24357323

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33426
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.81|      13|      44|     350|     362|       1
---------------------------------------------------------------------------
  350-  362 (20.72/13.25)	EKARKAEEAALEV
  395-  407 (22.09/14.61)	EKTSKTEDQDWEV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     129.90|      39|      44|     226|     266|       2
---------------------------------------------------------------------------
  226-  266 (65.43/43.62)	WA.GVSLRDHLEGgrPLRLPNSHGYNGDQSSEDQMRSFESLR
  272-  311 (64.47/36.92)	WSnGSGSSGHEQS..PVSQENNSAQWSMQSVEDVNAEVRRLR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33426 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ERIPVTGGRAYENRMNERIHPASQYGSYPGPGPGPGPGHHDVPYHSMSPGQSNSDWAGVSLRDHLEGGRPLRLPNSHGYNGDQSSEDQMRSFESLRSGGAYWSNGSGSSGHEQSPVSQENNSAQWSMQSVED
2) RPAPRPNKHPINRQPSNKFEGNENHSFQSTKSEPDFRQNHVDDTVKSPFA
171
112
302
161










Molecular Recognition Features






MoRF SequenceStartStop




1) LRSGGAY
265
271