<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33416

Description Uncharacterized protein
SequenceMEKGTPRFSISEAVQDTHLEQVEADMQQLFLPYRGFCSRRQMQHKEVVLEDYEVSKSIIEYLTNSCIDSIVVGSSSRNALTKKFKPPDVPSCLTKGAPEFCTVYVICKGKVQSLRSASRPAPGSSKQAPQSQSAAVPTPPAPKPEPVVIETDDAIRTPFGRGWRAPPSPGPRGSFERTNENRATLNRPLASTKSAPPFLLPPDQLETPRSSNCSDKLLGMARQSFDSPQSSMGMGMGMGMGMGMGMGMGMGMGGYHQSIDFTSDQLEFSATSIDSPRSSFSAQNPKDVEAEVRRLKLELKQTMDMYSSACKEAITAKQKARELNQWKLEEARKFEDARHAEETALAIAEMEKAKCRAALEAAGAAQRLAEKEAQKRMSAEMKAKREAEEKKKALDALAHSDVRYRKYTIEEIELATEYFSESLKIGEGGYGPVYKSTLDHTPVAIKVLRPDAAQGRMQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFRRGNSPSLPWPLRFKIAAEVATGLLFLHQTKPEPLVHRDLKPANILLDRNYNSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGVMLLQVITAKPPMGLTHHVERAIDRGTFSEMLDQTVPDWPVEEALSFAKLALRCAELRRKDRPDLGTVILPELNRLRNLGNAYAANAYSPRSQEVMSFPGMAQWRSSIDYGTSSRPTVGSSGSGEAPMSPQGSRVMPGNMTPYENTGLKH
Length759
PositionTail
OrganismAmborella trichopoda
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Amborellales> Amborellaceae> Amborella.
Aromaticity0.07
Grand average of hydropathy-0.469
Instability index52.50
Isoelectric point8.25
Molecular weight83780.72
Publications
PubMed=24357323

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process
pollen tube growth	GO:0009860	IEA:EnsemblPlants









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33416
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     292.52|      95|     109|     517|     623|       1
---------------------------------------------------------------------------
  517-  623 (142.68/111.95)	KIAAEVATGLL..FLHQTKPEPLVHRDLKPANILLdRNYNSKISD.VGLARLVPPSvadsVTQYRMTSTAGTFCYIDPEYQQT....GMLGIKSDIySLGVmllqviTAKPPMG
  627-  728 (149.84/89.32)	HVERAIDRGTFseMLDQTVPDWPVEEALSFAKLAL.RCAELRRKDrPDLGTVILPE....LNRLRNLGNAYAANAYSPRSQEVmsfpGMAQWRSSI.DYGT......SSRPTVG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.85|      19|      47|      97|     143|       3
---------------------------------------------------------------------------
   74-   92 (33.55/32.05)	SSSRNALTKKFKPPDVPSC
  116-  134 (33.30/17.35)	SASRPAPGSSKQAPQSQSA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     269.34|      65|     173|     248|     312|       5
---------------------------------------------------------------------------
  248-  312 (107.01/65.30)	MGMGMGGYHQSIDFTSDQLEFSATSIDSPRSSFSAQNPKDVEA..EVRRLKL...ELKQTMDMYSSACKE
  357-  421 (65.80/37.41)	AALEAAGAAQRLAEKEAQKRMSA.EMKAKREAEEKKKALDALAhsDVRYRKYtieEIELATEYFSE....
  423-  483 (96.53/58.20)	LKIGEGGYGPVYKST...LDHTPVAIKVLRPD.AAQGRMQFQQ..EVEVLSC...IRHPNMVLLLGACPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.73|      16|      24|     139|     161|       6
---------------------------------------------------------------------------
  139-  154 (30.00/10.50)	PPAPKPEPVVIETDDA
  166-  181 (29.73/22.15)	PPSPGPRGSFERTNEN
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33416 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DYGTSSRPTVGSSGSGEAPMSPQGSRVMPGNMTPYENTGLKH
2) SASRPAPGSSKQAPQSQSAAVPTPPAPKPEPVVIETDDAIRTPFGRGWRAPPSPGPRGSFERTNENRATLNRPLASTKSAPPFLLPPDQLETPRSSNCSDKLLGMARQSFDSPQSSMGMGMGMGMGMGMGMGMG
718
116
759
249










Molecular Recognition Features






MoRF SequenceStartStop




NANANA