<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33392
Description |
Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MSLSLSSLSFLSPKPAPELSQLKLFPARRLSPHKAHPSLSSPPNLLAELSLIKLFPARSLSPQKARGFSLSSRHPCSRTGLSHLALIKPVSLSHKFGFYKSSSNPSASLSLSTLTEHAVPDQSWVFFLSTLTTKTDDVLPSLEEQGVRQLYPKGPNIDYKKELRALNRELQLHLLGLADVLVERPSQYAWRVEEISLIFRNLHHLLNSLRPHQARATLIHILELQIQCRKQAVEDIKRIQHMVLFPPPLVAVSCFFTWVFRRREEAQQLLKESLETLDGHLP |
Length | 282 |
Position | Middle |
Organism | Amborella trichopoda |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Amborellales> Amborellaceae> Amborella.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.169 |
Instability index | 65.69 |
Isoelectric point | 9.80 |
Molecular weight | 31915.67 |
Publications | PubMed=24357323
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP33392
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 126.39| 29| 29| 13| 41| 1
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4- 35 (42.12/19.24) ...SLSSlsflsPKPAPELSQLKLFPARRLSPHKA
36- 65 (49.16/23.55) HP.SLSS....pPNLLAELSLIKLFPARSLSPQKA
66- 95 (35.10/14.93) RGfSLSS...rhPCSRTGLSHLALIKPVSLS.HK.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 139.70| 45| 65| 104| 148| 2
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104- 148 (76.13/46.87) NPSASLSLSTLTEHAV..PDQ.SW.VFFLSTLTTKTDDVLPSLEEQGVR
167- 215 (63.57/38.05) NRELQLHLLGLADVLVerPSQyAWrVEEISLIFRNLHHLLNSLRPHQAR
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