<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33355

Description Uncharacterized protein
SequenceMAPPRGRGGGSYSGGGSFSGGGGSGGFRGGRGDRGRGRGGGGRGGDRGTPFKARGGGRGGRGGGRGGGRGGGRGGGMKGGSRVVVQPHRHEGIFIAKGKEDALVTKNLVPGEAVYNEKRITVQNEDSSKVEYRIWNPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKTGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRMPKKKKDTA
Length321
PositionUnknown
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.07
Grand average of hydropathy-0.438
Instability index31.72
Isoelectric point10.16
Molecular weight33808.94
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
methyltransferase activity	GO:0008168	IEA:UniProtKB-KW
RNA binding	GO:0003723	IEA:UniProtKB-KW

GO - Biological Process
methylation	GO:0032259	IEA:UniProtKB-KW
rRNA processing	GO:0006364	IEA:UniProtKB-KW









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33355
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      95.64|      15|      16|      34|      48|       1
---------------------------------------------------------------------------
   15-   29 (30.21/ 8.08)	GGSFSGGGGSGGFRG
   34-   48 (34.99/10.52)	RGRGRGGGGRGGDRG
   52-   66 (30.44/ 8.20)	KARGGGRGGRGGGRG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.03|      17|      18|     202|     218|       2
---------------------------------------------------------------------------
  182-  205 (20.30/12.81)	TGVVYAVEfshrsgrDLVNMAKKR
  206-  222 (30.72/22.74)	TNVIPIIE.......DARHPAKYR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.71|      13|      18|      73|      85|       4
---------------------------------------------------------------------------
   73-   85 (23.36/12.11)	RGGGM...KGGSRVVV
   89-  104 (17.34/ 6.95)	RHEGIfiaKGKEDALV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.27|      37|     159|     109|     149|       5
---------------------------------------------------------------------------
  109-  149 (50.55/43.40)	VPGEAVYnEKRITVQNEDSSK.VEYRiwNPFRSKlAAAILGG
  271-  310 (56.71/38.57)	VPAEAVF.ESEVNKLKADQFKpFEQVtlEPFERD.HACVVGG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33355 with Med36 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MAPPRGRGGGSYSGGGSFSGGGGSGGFRGGRGDRGRGRGGGGRGGDRGTPFKARGGGRGGRGGGRGGGRGGGRGGGMKGGSRVVVQPHRHE
1
91










Molecular Recognition Features






MoRF SequenceStartStop




1) MAPPRGRGGGSYSGGGSFSGGGGSGGFRGGRGDRGRGRGGGGRGGDRGTPFKARGGGRGGRGGGRGG
1
67