<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33348

Description Uncharacterized protein
SequenceMDSKDFRSILESAGIDIWMLMDVAIAVASVDHSDELRRRRDGIVERLYATSSVSSPPCPNCDVDDVREIEMKSNVNPSVEEEKETCEVLFDDEQKKILEIKEQLEDPHQSIDSLLELLQNLADMDITFQALEETDIGRHVNRLRKHSSNDVKKLVKLLVRKWKEIIDEWMKLKTPGEATTTVVADEDSPQEKILQNGHRQIPDFADSPNALNESFGSEHNNIEPQQRKPKAIPRKESPPQPSASRQRESNFELDKLASARKRLIENYKEVANAKKQRTIQVMDLHELPKPKNAFFGKNKGGTSQRKHW
Length308
PositionUnknown
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.05
Grand average of hydropathy-0.849
Instability index58.36
Isoelectric point5.64
Molecular weight35326.43
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33348
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     342.12|      95|      95|      91|     185|       1
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   20-   86 (60.87/29.13)	...............................LMDVAIAVASVDHSDELRRrrdgiVERLYATSSV.SSPPCPNCDVDDVREI..EMKSNVNPSveEEKETC...
   91-  185 (153.69/82.94)	DDEQKKILEI.KEQLEDPHQSIDSLLELLQNLADMDITFQALEETDIGRH.....VNRLRKHSSN.DVKKLVKLLVRKWKEIIDEWMKLKTPG..EATTTVVAD
  187-  283 (127.56/67.78)	DSPQEKILQNgHRQIPDFADSPNALNESFGS.EHNNIEPQQRKPKAIPRKesppqPSASRQRESNfELDKLAS..AR..KRLIENYKEVANAK..KQRTIQVMD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33348 with Med26 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GEATTTVVADEDSPQEKILQNGHRQIPDFADSPNALNESFGSEHNNIEPQQRKPKAIPRKESPPQPSASRQRESNFELDK
2) IENYKEVANAKKQRTIQVMDLHELPKPKNAFFGKNKGGTSQRKHW
176
264
255
308










Molecular Recognition Features






MoRF SequenceStartStop




1) NAFFGKNK
2) TSQRKHW
292
302
299
308