<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33330

Description Uncharacterized protein
SequenceMAEFQLIVVVESTAAMGPYWETILVDYLDKMIRSFGGNDSTGQKSSTPNVEFALVTYNTHGCYSGCLVQRTGWTRDPDVFFLWLSSIPFNGGGFNDAAIAEGLSEALMMFPNSQSGGPNQQSVDVHKHCILIAASNPYPLQTPVYVPRPQNLEQSETIDSDSGNRLYDAEAVAKAFPQFSISLSVICPKQLPKIKAIYNAGKRSNRAADPPLEAKTPHFLILISESFREARSALSRSGITSLPSNQSPVKVDAVSVTPVTGAPPTSMPSVNGSIANRQPVPAGNVAPPATVKVEQVPVTSMVSGPPFPHNSSVPRATSTSQVVPSLQTSSPSSVSQDIITNNENAQDTKPTVSMLQSLRPVNPTQANVSILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSVPAAQNVFPSGQSGITSITSSGPLSVPAQVGQNPGLGSLTSNTSNLSSSSNIGISQPLGNLQGAVSMGQQASGMSQGNLSGPQMVQGGVPMNQNAMSALGSSVVSSGNGTMIPTPGMSQQVQSGMQALGNNAAANMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSSASESLASNWPSVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQLSSQQQQQMQQQHQQMQSQQQHLPQLQQQQQLPHMQQQQLPQMQQQQQQLQQQQQQQQLPQLQQQQQQLPQLQQQQQLPQVQQQQLSQLQQQQLPQIPQQQQLPQLQQQIPQLQQQQQQLPQLQQLQPQQQQMVGAGMGQAYVQGPGRSQLVSQGQVSSQGTTNIGGGGFMS
Length863
PositionUnknown
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.05
Grand average of hydropathy-0.403
Instability index67.60
Isoelectric point8.82
Molecular weight92681.44
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33330
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     154.47|      15|      15|     765|     779|       1
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  696-  708 (27.87/ 6.01)	QQQQMQQ...QHQ..QM.Q
  719-  733 (33.38/ 8.60)	QQQQLPHM..QQQ..QLPQ
  746-  762 (30.02/ 7.02)	QQQQLPQLqqQQQ..QLPQ
  765-  779 (33.82/ 8.81)	QQQQLPQV..QQQ..QLSQ
  790-  806 (29.39/ 6.72)	QQQQLPQL..QQQipQLQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      86.34|      21|      23|     417|     437|       2
---------------------------------------------------------------------------
  279-  303 (23.07/ 6.15)	PVPAG.NVAPPAtvkveQVPVTSMVS
  399-  416 (24.82/ 7.29)	QTPVAMHMSNMI.....SSGMT...S
  417-  437 (38.45/16.17)	SVPAAQNVFPSG.....QSGITSITS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.09|      15|      23|     479|     498|       3
---------------------------------------------------------------------------
  479-  495 (20.35/ 9.61)	QGAVsMgQQASGMSQGN
  608-  622 (19.75/ 6.39)	WPSV.M.QIVRLISQDH
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.77|      17|      23|     524|     543|       4
---------------------------------------------------------------------------
  532-  553 (25.22/12.39)	PGMSQQVQSGMQalgnnAAANM
  819-  836 (24.55/ 7.28)	PQQQQMVGAGMG....qAYVQG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.17|      16|      22|     441|     456|       5
---------------------------------------------------------------------------
  441-  456 (29.03/11.33)	LSVPAQVGQNPGLGSL
  463-  478 (25.15/ 8.78)	LSSSSNIGISQPLGNL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.66|      27|      28|      25|      52|      10
---------------------------------------------------------------------------
   19-   48 (39.61/31.74)	YWETilVDYLDKMIRSFGGNDSTGQkSSTP
   49-   77 (48.05/33.89)	NVEFalVTYNTHGCYSGCLVQRTGW.TRDP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     119.10|      29|      56|     305|     333|      11
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  305-  333 (50.69/25.94)	PPFPHNSSVPRATSTS.QVVPSLQTSSPSS
  337-  360 (30.39/12.38)	DIITNNEN...AQDTK.PTVSMLQSLRP..
  362-  391 (38.02/17.48)	NPTQANVSILNNLSQArQVMNSAALSGGTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.85|      11|      73|     735|     745|      12
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  735-  745 (22.10/ 7.46)	QQQQQQLQQQQ
  808-  818 (21.75/ 7.22)	QQQLPQLQQLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      53.29|      11|      48|     633|     643|      15
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  633-  643 (20.74/13.58)	DFLVFRAMNPH
  673-  683 (18.04/10.80)	AFRLIGMLFPG
  684-  691 (14.51/ 7.16)	DMVVFK...PQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.86|      34|      38|     149|     184|      16
---------------------------------------------------------------------------
  149-  184 (49.44/43.73)	PQNLEQSETIdSDSG...NRLYDAEAVAKAfPQFSISLS
  188-  224 (55.42/37.81)	PKQLPKIKAI.YNAGkrsNRAADPPLEAKT.PHFLILIS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33330 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LSRSGITSLPSNQSPVKVDAVSVTPVTGAPPTSMPSVNGSIANRQPVPAGNVAPPATVKVEQVPVTSMVSGPPFPHNSSVPRATSTSQVVPSLQTSSPSSVSQDIITNNENAQDTKPTVSMLQSLRPVNPTQANVSILNNL
2) PLGNLQGAVSMGQQASGMSQGNLSGPQMVQGGVPMN
3) QVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSVPAAQNVFPSGQSGITSITSSGPLSVPAQVGQNPGLGSLTSNTSNLSSSSNIGIS
4) SVVSSGNGTMIPTPGMSQQVQSGMQALGNNAAANMPLSQQTSGG
234
474
379
519
374
509
472
562










Molecular Recognition Features






MoRF SequenceStartStop




NANANA