<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33329

Description Uncharacterized protein
SequenceMDQSQNPRAATSTTPSRSFQFHPARGPILDLFNLYLGLGRNSRNKPEDSLRDPPNKTQKRVHALNRELPPPNEQFILDFEQLQSQFPDQDQLRSVTEAILISLVVQCSGHGPRADFLLFVLRSLCGIGCINWDSLLQSLLSSVSSAELPVGQLNQAVPTVSSSSLSQTGMLPPPSTIANSSNFQSSNPASPLTAVHTIGSPAQSTIESLSCAAMSPVKSSDISSAGQQSKLRGSSAIRNNDISNSSLRQLCCKIILIGLEFSLKPVTYAEIFNHMLNWLVNWDQRQQGMDESDVIKSWRPDKAVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTHVSGETHMRLSPITYSSVLGEPLHGEDIASSIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPCYRPSSQMPTAGAVFSSEMICEATINRIVELLKMTNSEINCWQDWLVFSDIFYFLIKSGCIDFVDFVDKLVSRLSEGDHHILKTNHVTWLLAQIIRIEQVMNALNSDPRKVETTRKILSFHREDRSADPNNSQSILLDFVSSCQNLRIWSLNSSTRDYLNNEQLQKGKQIDEWWRQASKGDRMVDYMNMDERSIGMFWVVTYTMAQPACETVMNWLNSAGVADLLPGTNLQPAERLMATREVSPLPMSLLSGFSINLCVKLSYQMEDSLFSGQVIPSIAMVETYTRLLLLAPHSLFRSHFNHLVQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAIKGKRGDHRVFRLAENLCLNLIFSLRDFFLVKREGKGPTDFTETLNRVTVITLAILIKTRGIADAEHLLYLQNMLEQIMATSHHTWSEKTLHHFPSVLREALSGRIDKRSLDIQTWQQAETTVIHQCNQLLSPSADPSYVMTYLGHSFPQHRQYLCAGALILMHGHAENINSGNLGRVLREFSPEEVTSNIYTMVDVLLHHMQIELQQGHSLQDLMLKASASLAFFVWTNELLPLDILLLALIDRDDDTHALRIVISLLDRQELQQRVKLFCMTRGHPEHWLYSGIFKRVELQKALGNHLAWKDRYPVFFDDIAARLLPVIPLIIYRLIENDAMDTAERVLAMYTPLLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNVLDVSKIPFLESFPLQISLTNPVMCPPLDYFTTLLLGIVNNVIPPLHNNSKSGSMGEASNNAQRTTQSKPAVVSQSGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVQSLVQIVVNIQPTLIQSSNALHGGSNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACGLLLAQLPSDFHSQLYLETTRIIKENWWLKDGTRSLGEIDSAVGYALLDPTWAAQDNTSTAIGNVVALLHSFFSNLPQEWLEGTNVIIKQLRPVTSVALLRIAFRIMGPLLPKLANAHALFNKTLSSLLSILVDVFGKNSQTTIAVDASDIADIIDFLHHIVHYEGQGGPVQAISKPRADVLALIGRASENLRPDIQHLLSHLNPDVNSSVYAASHPKLVQNPT
Length1611
PositionTail
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.07
Grand average of hydropathy-0.056
Instability index45.84
Isoelectric point6.53
Molecular weight180228.87
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33329
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.55|      20|     181|     316|     340|       1
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  316-  340 (31.50/34.26)	WLLVDEgkcrvPFYELLRSD.LQFIE
  500-  520 (33.05/21.15)	WLVFSD.....IFYFLIKSGcIDFVD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     178.68|      56|     537|     920|    1052|       2
---------------------------------------------------------------------------
  995- 1052 (88.39/164.49)	SNIYTMVDvLLHHM.QIElQQGHSLQDLMLKASASLAFFVWTNELLPLDI.LLLALIDRD
 1536- 1593 (90.29/31.91)	SDIADIID.FLHHIvHYE.GQGGPVQAISKPRADVLALIGRASENLRPDIqHLLSHLNPD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     131.13|      38|     109|     523|     561|       3
---------------------------------------------------------------------------
  523-  561 (62.80/50.21)	DKLVSRLSEGDHHILKTNH..........VTWLLAQIIrIEQVMNALNS
  626-  673 (68.33/49.57)	DEWWRQASKGDRMVDYMNMdersigmfwvVTYTMAQPA.CETVMNWLNS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     131.91|      41|     102|      68|     112|       4
---------------------------------------------------------------------------
   68-  112 (64.71/51.46)	LPPPNEqfILDFEQLQSQFPDQ.....DQLRSVTEAILISLvvQCSGHGP
  171-  216 (67.21/41.01)	LPPPST..IANSSNFQSSNPASpltavHTIGSPAQSTIESL..SCAAMSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     124.01|      43|     109|     679|     725|       6
---------------------------------------------------------------------------
  679-  725 (63.29/50.48)	LLPGTNLQPAER.LMatREVSPLpMSLLSG.......FSI..NLCVKLSYQMEDsLF
  783-  835 (60.72/34.34)	LLPLYRYQGKSKaLM..YDVTKI.ISAIKGkrgdhrvFRLaeNLCLNLIFSLRD.FF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.96|      17|     102|    1176|    1213|       7
---------------------------------------------------------------------------
 1152- 1168 (30.57/32.15)	PLLAYYPLRFTFVRDI....L
 1193- 1213 (24.39/14.68)	PFLESFPLQISLTNPVmcppL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.92|      31|     182|    1284|    1326|       8
---------------------------------------------------------------------------
  249-  281 (48.61/21.02)	QLCCKIILIGLeFSLkPVTYAEIFNHMLNWLVN
 1284- 1314 (48.31/41.95)	QLVLETAVIEI.LSL.PVSAAQIVQSLVQIVVN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.56|      30|     540|      36|      65|      10
---------------------------------------------------------------------------
   36-   65 (53.83/31.42)	LGLGRNSRN.KPEDS...LRDPPNKTQK.RVHALN
  573-  607 (41.73/22.71)	LSFHREDRSaDPNNSqsiLLDFVSSCQNlRIWSLN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     123.12|      39|     326|    1080|    1130|      13
---------------------------------------------------------------------------
 1087- 1130 (62.29/62.47)	WLYSGIFKRVELQKALGNHL...AWKDRypvffDDIAARLLPVIPLI
 1415- 1456 (60.83/32.31)	WLKDGTRSLGEIDSAVGYALldpTWAAQ.....DNTSTAIGNVVALL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33329 with Med23 domain of Kingdom Viridiplantae
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