<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33323

Description Uncharacterized protein
SequenceMELLKPLHPHHAPNLCLPFHGHPSSSQSQSPLPLPMPRKVHVAVGKSIDKAVTLLQWTFNHFQHAEIVILHAYQPSLTIPTLLGKLPASQASPAVVSAFRCVEREQTMKLLDKYLTICRTARVKASIIVTEADQVQKGIVDLVVKHSIQKLVIGAVPENCMKVKRNSGKANYTAKNAPPFCEVWFIYKGKVIWTREASETPCSSSSCAQPEIATAESLRCRSFQYGKNELFDSECLQPNSARSATGLGIRSCVHEEITETEATFSSKASSCGSHCSSQNSSRAHLDTYLEAMEEKINKQLIETKIEAEAVSDEAFANLLKCERLEVEAMEAIRKVNLFESAHVREVKLRKEAEDALRAAVQEQQKLLNESEEIASELQMTMRNIALLDSHAQEANRRRDEAADELSLIQESISTLWQERQQIRRQKMEALRWLERWRSRGQVGAPRCNGVIGFPEELPELAEFSSSDLQNATCNFSNSFKIVQGGFGCIYKGEMLGRTVTIKKFHQHTMQGPMEFRQEVQVLGSLQHPHLITLLGVCPEAWSIVYEYLPNGTLQDYLFRKSNNSPLTWNTRARMIAEIASALCFLHSFKPETIIHGDLKPETVLLDSSLGCKICGFGFCSLVSEESLLRPSFRLSTEPKGAFTYTDPEFHRTGILTTKSDIYSFGLIILQLLTDKTPVGLAALVRNAASCGKLSSILDSSAGEWPSPVASRLVELGLQFCQQNRRDRPDLTPTLVRELEQMHASEERPVPSFFLCPILQEIMHDPQVAADGFTYEGDAIREWLENGHDTSPMTNLKLNHLFLTPNHALRLAIHDWLCKS
Length819
PositionTail
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.07
Grand average of hydropathy-0.270
Instability index50.92
Isoelectric point6.42
Molecular weight91769.98
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33323
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.84|      36|     129|     458|     497|       1
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  458-  497 (58.56/47.39)	PElaEFSSSDLQNATCNFSNSF..KIVqgGFG.C.IYKGEMLGR
  590-  629 (51.28/30.10)	PE..TIIHGDLKPETVLLDSSLgcKIC..GFGfCsLVSEESLLR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     143.07|      43|      46|     332|     376|       2
---------------------------------------------------------------------------
  295-  327 (31.81/16.93)	..KINkqLIET......KI...EAE....AVSDEAfANLL.KCERLEVE
  332-  376 (60.57/47.98)	IRKVN..LFESaHVREVKLRK.EAEDALrAAVQEQ.QKLLNESEEIASE
  381-  422 (50.69/31.25)	MRNIA..LLDS.HAQEANRRRdEAADEL.SLIQESiSTLWQERQQI...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.87|      34|     450|      52|      87|       4
---------------------------------------------------------------------------
   52-   87 (57.19/45.65)	VTLLQWTFNHFQ.....HAEIVILHAYQ.PSLTipTLLGKLP
  499-  538 (51.68/33.95)	VTIKKFHQHTMQgpmefRQEVQVLGSLQhPHLI..TLLGVCP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     201.93|      59|     417|     223|     281|       5
---------------------------------------------------------------------------
  223-  281 (103.43/73.51)	FQYGKNELFDSECLQPNSARSATGLGIRSCVHEEITETEATFSSKASSCGSHCSSQNSS
  642-  700 (98.50/69.61)	FTYTDPEFHRTGILTTKSDIYSFGLIILQLLTDKTPVGLAALVRNAASCGKLSSILDSS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33323 with Med32 domain of Kingdom Viridiplantae
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