<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33319

Description Uncharacterized protein
SequenceMDNNNWRPNQGTEANMDTSDWRGGLQQESRQRIVNKIMDTLKRHLPVSGQEGLHELQKIAQRFEEKIFTAATSQSDYLRKISLKMLTMETKSQGTMANPPNQGGPSNKPPDPGLVIPPQVHNPGQQHSIPMPNQSQARQQLIQNNIASQSSGLTQTPIQNVGQNNPNMQNMPGQNSVGNTINQNSNMQNMFAGSQRQIQARQQVVPQQQQQSQNPQQYLYQQQIQQQLLRQKFHQQQQQQQQQQQQQQQQSLLQPNQLQSSQQPVIQTSSVMQQNPMMQTSLPSIQHNQQSNNVQQSTQSVLQQHSQVLRQQQPQQNSIIHQQQTPIGQQSILPPQQQQQQQQQQQQQQQQLMGAQGNATNMQHAQIHGTQNNVGDLQQPQRLLAQQNNLSNLQQQQLINQQNSLSNMHQQLGNNVSGLQQQQVLGPQSGNSGMQTSQHSAHVLQQSQVQIQPQSQQNASNLLPSQGQQSQSLASQQQLMPQIQSQPAQLQQQLGLQQQPNSLQRDMQQRLQASGPLLQQSNVLDQQKQLYQSQRPLPETSSTSLDSTAQTGQSSGGDWQEEVYQKIKSMKESYLPELNEMYQKITSRLQQHDSLSQQPKSEQLDKLKVFKMMLERIITFLQVSKSNISASFKEKLGSYEKQIINFINTNRPKKNLPGQLPPPHMHSMSQSQPQVTQVQSHENQMNSQLQAANMQGSVATMQQNNMANMQHNSLSGVSTAQQSKMNSMQPNTNLDSGLGNAVNSIQQVAVSSLQQNPASAPQQTNVNSLSSQSGVSVIQPNLNPLQQGSSMLQHQQLKQQEQQMLQNQQLKQQYQRQLMQRKQQQIMQQQQQQLHQTAKQQLPAQLPTHQIQQLHQMNDANDIKMRQGIGVKPGVFQQHLTSSQRSAYPHQQMKGSPFPGSSPQLQATSPQIPQHSSPQVDQQNHLPSLTKVATPLQSANSPFVVPTPSPPLAPSPMPGDSEKPISGVSLISNAANIGYQQSGGATAPAQSLAIGTPGISASPLLAEFTGPDGALGNAFVSTSGKSTVPEQPIERLIKAVKSMSSKTLCSAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVAMTNCRLQARNFITQDGANGTRRMKRYTYATPLNVVSSAGSMNDSIKQLAATEVSDLDSTATSRFKMPRVEANHSLLEEIREVNQRLIDTVVDISNEEVDPTAAAAAAEGTEGTIVKCSYNAVALSPSLKSQYASVQMSPIQPLRLLVPTNYPNCSPILLDKFPVESGKENEDLSVKAKSRFSISLRSLSQPMSLGEIARTWDVCARTVISEHAQQSGGGSFSSKYGTWENCLTT
Length1318
PositionTail
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.03
Grand average of hydropathy-0.824
Instability index70.47
Isoelectric point9.35
Molecular weight145489.55
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33319
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     802.81|      98|      98|     199|     296|       1
---------------------------------------------------------------------------
  100-  192 (83.60/13.73)	............PNQGGPSNK..PPD.................PGLV.IPPQVHNPGQQHSipMPNQS.....QARQQLIQNNiA.........SQSSgltQ.TPI...Q.NV....GQN....NP.N..MQ..NMPgqnS........V.G.....NtiNQNS..NmqNMFA
  199-  296 (191.07/42.50)	QARQQ.....VVPQQQQQSQN..PQQY..LYQQ......Q..IQQQL.LRQKFHQQQQQQQ..QQQQQ.....QQQQSLLQPN.Q.........LQSS...Q.QPVIQTS.SV....MQQ....NP.M..MQ.TSLP...S........I.Q.....H..NQQS..N..NVQQ
  303-  374 (105.76/19.66)	QQHSQ.....VLRQQQ.......PQQNsiIHQQ......QtpIGQQS.I...LPPQQQQQQ..QQQQQ.....QQQQQLM.GA.Q.........GNAT...N...............MQH.....A..............Q........I.......H..GTQ...N..NV..
  378-  451 (90.51/15.58)	...QQ.......PQRLLAQQN..NLSN..LQQQ......Q.lINQQN.SLSNMHQQ...LG..NNVSG.....LQQQQVLGPQ.S.........GNSG................................MQ.TSQH...S..........A.....H..VLQQ..S..QVQI
  452-  560 (102.36/18.76)	QPQSQqnasnLLPSQGQQSQSlaSQQQ..LMPQiqsqpaQ..LQQQLgLQQQPNSLQRDMQ..QRLQAsgpllQQSNVLDQQK.Q.........LYQS...Q.RPLPETS.S.....................TSLD...S........TaQ.....T..GQSS..G..GDWQ
  562-  657 (69.41/ 9.94)	EVYQK.....I..KSMKESYL..PELN..EMYQ......K..ITSRL........QQHDSL..SQQPK.....SEQLDKLKVF.KmmleriitfLQVS...K.SN.ISAS....................FK.EKLG...SyekqiinfI.N.....T..NRPK..K..NLP.
  659-  729 (59.75/ 7.35)	.............................................QL.PPPHMHSMSQSQP..QVTQV.....QSHENQMNS..Q.........LQAA...N....MQGSvAT....MQQ....NN.ManMQhNSLS...G........V.S.....T..AQQSkmN..SMQ.
  793-  892 (100.34/18.22)	Q.HQQ.....LKQQEQQMLQN...QQ....LKQ......Q..YQRQL.MQRKQQQIMQQQQ..QQLHQ.....TAKQQL..PA.Q.........LPTH...QiQQLHQMN.DAndikMRQgigvKPgV..FQ.QHLT...S........S.QrsaypH..QQ...........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      67.40|      14|      15|     740|     753|       2
---------------------------------------------------------------------------
  740-  753 (22.28/11.13)	NAVNSIQQVAVSSL
  756-  769 (23.67/12.44)	NPASAPQQTNVNSL
  780-  791 (21.46/10.36)	PNLNPLQQ..GSSM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.52|      15|      15|    1037|    1051|       3
---------------------------------------------------------------------------
 1037- 1051 (25.17/19.57)	IKAVKSMSSKTLCSA
 1055- 1069 (25.35/19.76)	IGSVVSMNDRIAGSA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     174.81|      46|     111|     958|    1004|       4
---------------------------------------------------------------------------
  895-  932 (47.80/17.05)	GSPFPGSS.........P..QLQAtSPQiPQHSSPQVDQQNHLPSLTKV......
  933-  983 (57.91/25.84)	.AT.PLQSanspFVVPTPspPLAP.SPM.PGDSEKPISGVSLISNAANIgYQQSG
  984- 1024 (69.09/28.18)	GATAPAQS....LAIGTP..GISA.SPL.LAEFTGP.DGA..LGNAF...VSTSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.69|      15|      19|      56|      74|       5
---------------------------------------------------------------------------
   56-   74 (19.93/27.20)	LQKIAQrfeeKIFTAAT.SQ
   78-   93 (21.75/15.00)	LRKISL....KMLTMETkSQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.58|      27|      47|    1225|    1251|       7
---------------------------------------------------------------------------
 1225- 1251 (48.46/33.20)	QPLRL.LVPTNYPNCSPILLDKFPVESG
 1274- 1301 (43.12/28.67)	QPMSLgEIARTWDVCARTVISEHAQQSG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33319 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FINTNRPKKNLPGQLPPPHMHSMSQSQPQVTQVQSHENQMNSQLQAANMQGSVATMQQNNMANMQHNSLSGVSTAQQSKMNSMQPNTNLDSGLGNAVN
2) IQQVAVSSLQQNPASAPQQTNVNSLSSQSGVSVIQPNLNPLQQGSSMLQHQQLKQQEQQMLQNQQLKQQYQRQLMQRKQQQIMQQQQQQLHQTAKQQLPAQLPTHQIQQLHQMNDANDIKMRQGIGVKPGVFQQHLTSSQRSAYPHQQMKGSPFPGSSPQLQATSPQIPQHSSPQVDQQNHLPSLTKVATPLQSANSPFVVPTPSPPLAPSPMPGDSEKPISGV
3) KQLYQSQRPLPETSSTSLDSTAQTGQSSGGDWQEE
4) MDNNNWRPNQGTEANMDTSDWRGGLQQESRQRIVNKIMDTLKRHLPVSGQEGLHELQKIAQRFEEKIFTAA
5) QQPQQNSIIHQQQTPIGQQSILPPQQQQQQQQQQQQQQQQLMGAQGNATNMQHAQIHGTQNNVGDLQQPQRLLAQQ
6) QQQLINQQNSLSNMHQQLGNNVSGLQQQQVLGPQSGNSGMQTSQHSAHVLQQSQVQIQPQSQQNASNLLPSQGQQSQSLASQQQLMPQIQSQPAQLQQQLGLQQQPNSLQRDMQQRLQASGPLLQ
7) QQQQQQQSLLQPNQLQSSQQPVIQTSSVMQQNPMMQTSLPSIQHNQQSNNVQQSTQSV
8) RKISLKMLTMETKSQGTMANPPNQGGPSNKPPDPGLVIPPQVHNPGQQHSIPMPNQSQARQQLIQNNIASQSSGLTQTPIQNVGQNNPNMQNMPGQNSVGNTINQNSNMQNMFAGSQRQIQARQQVVPQQQQQS
646
745
528
1
312
395
244
79
743
968
562
71
387
519
301
212










Molecular Recognition Features






MoRF SequenceStartStop




NANANA