<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33316

Description Uncharacterized protein (Fragment)
SequenceGNVIPLSQVRNDVATAFRKEVEWEKNQMMLPFKRLCEQRKVHVDVVVIESDDVAIAVAEEVAKGAITKLVVGASSSGIFKSKQKGMSMKISVSTPRFCTVYAISKGKLSIRQSDMPIDVSIMDDASETSFSSSSSSNYTSTSQTESTSVSSYAGLHSSSLATQRFQALSSINSVLLSTNPSLSDTSHSRGQSLDLGRENTATSSARNSDIDHALSRVSSCKSFISDTESWMYDQNSIKDVALATTFPSPNMQAKFNLELEKLRIELRHAQGLHAVAQSEKTEACRKLNDLSKRRSEETMKMKEIVAKEEKAEELAKLESEKYQDASREAVYLKECAEREAAERKETELRVIRATKEKEKLVDALSGTMLQYRKFTWDEIVSATSSFSEDLRIGMGAYGTVYKCNLYHTTVAVKVLNTNGNRESKQFQQELEILSRIRHPNLLLLLGACHDHGCLVYEYMENGNLEDRLLRKNNTSPITWFDRFRIAWEIASALAFLHSSNPEPIIHRDLKPANILLGRNLVSKIGDIGLSTVLHSDNLSTMFKDTAPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALAHKVEIAIEGGNLTDILDPEAGAWPFKETLDLAVLGLSCAELRRRDRPDLKDQVLPTLERLKEVADRAQHSASTVTIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLQENDNSPMTNMALPHKHLIPNYTLLSAILEWKSRES
Length740
PositionTail
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.06
Grand average of hydropathy-0.355
Instability index44.24
Isoelectric point6.28
Molecular weight82538.90
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33316
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      77.03|      18|      27|      75|      92|       1
---------------------------------------------------------------------------
   75-   92 (29.00/22.89)	SSGIFKSKQKGMSMKISV
  104-  121 (27.48/21.22)	SKGKLSIRQSDMPIDVSI
  134-  150 (20.55/13.63)	SSSNYTSTSQTESTSVS.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.10|      11|      39|      11|      21|       3
---------------------------------------------------------------------------
   11-   21 (19.13/11.58)	NDVATAFRKEV
   51-   61 (17.96/10.49)	DDVAIAVAEEV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.33|      11|      29|     254|     265|       4
---------------------------------------------------------------------------
  254-  265 (14.53/14.46)	KFNlELEKLRIE
  286-  296 (18.80/12.68)	KLN.DLSKRRSE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      86.98|      16|      59|     267|     282|       5
---------------------------------------------------------------------------
  267-  282 (24.27/14.65)	RHAQGLHAVAQSEKTE
  297-  312 (20.96/11.73)	ETMKMKEIVAKEEKAE
  327-  342 (22.98/13.51)	REAVYLKECAEREAAE
  343-  358 (18.76/ 9.80)	RKETELRVIRATKEKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.98|      16|      26|     177|     192|       6
---------------------------------------------------------------------------
  177-  192 (28.35/18.56)	STNPSLSDTSHSRGQS
  204-  219 (26.63/16.97)	SARNSDIDHALSRVSS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33316 with Med32 domain of Kingdom Viridiplantae
Unable to open file!