<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33309

Description Uncharacterized protein
SequenceMGSIVVEDADTDTVYVAVGKNAEKTHQLLHWTVKNFSGKNVCLLHIHRPYSLNSFSCSTDRNLSGYEPKDLPVQAFQDQGNQTVHELLDQYILTLVPAGVRACKLLIEMDDIEKGITKAIAQHSIRWLVVGAAADEYNMGKLAKQDSEKANFIREQALLSCNIWFICKGNLICTRVYSKHTSDIESGPALLVLNSNTEKTKSELNPDALKYLDSDDMKEIQSISSHRSLSTKWSFNKVMDRSKLADLMFHEDEAFESRCATEIRRRKEVEEQLATSKQEVQKMKNQQDEIFEELQMVKDQSSALINQISESQCTATEFEEKIISAVDLLISFREKRDRLRIEHANAAREVQVLRKFGEADTSFSYQVEFPAFSFLEINEATHDFDPSWKIGEGRYGSVYKGLLRNMHVAIKMLPSYGRERLSEFQHQVEVLSRVRHPNLLTLIGSCAESRSLVYEYINNGSLESHLARKEKNPLPWQIRISVATDICSALIFIHSSKPCIIHGNLKPSKVLLDANFVAKLSDLGIPSLVQQSLHSADASTVCNNPNERLAYVDPEYFVSGKFTPESDVYSFGVILLQLLTGRPLLGLVRDMKCALEKENLKAVLDLSAGEWPLYQTELLAYLALRCCEKSWLNRPDLVSEIWSVLEPFKATRIDKSYLISKKLHRVPSHFVCPIVQEVMEDPYIAADGFTYEAEAIRGWLNSGHDTSPMTNLKLDHTDLVPNYALHNAILEWQQQ
Length735
PositionTail
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.08
Grand average of hydropathy-0.298
Instability index38.33
Isoelectric point5.80
Molecular weight83382.07
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33309
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.08|      15|      16|     185|     199|       3
---------------------------------------------------------------------------
  185-  199 (25.47/16.48)	ESGP.ALLVLNSNTEK
  203-  218 (22.61/13.85)	ELNPdALKYLDSDDMK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     141.41|      46|     209|      44|      90|       4
---------------------------------------------------------------------------
   44-   90 (77.66/59.80)	LHIHRPYSLNSfSCSTD.RNLSGYEPK....DLPVQAFQDQGNQTVHELL...DQ
  247-  300 (63.75/43.32)	LMFHEDEAFES.RCATEiRRRKEVEEQlatsKQEVQKMKNQQDEIFEELQmvkDQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     123.84|      37|     127|     528|     567|       9
---------------------------------------------------------------------------
  528-  567 (56.93/43.88)	LVQQSLHSADASTVCNNPNERLayVDPeYFVSGKFTPESD
  658-  694 (66.91/40.41)	LISKKLHRVPSHFVCPIVQEVM..EDP.YIAADGFTYEAE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33309 with Med32 domain of Kingdom Viridiplantae
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