<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33304

Description Uncharacterized protein
SequenceMTQVEGVRACKLLIEMDDIEKGITKAIAQHSIRWLVVGAAADEYNMGKLAKQDSEKANFIREQALLSCNIWFICKGNLICTRVYSKHTSDIESGPALLVLNSNTEKTKSELNPDALKYLDSDDMKEIQSISSHRSLSTKWSFNKVMDRSKLADLMFHEDEAFESRCATEIRRRKEVEEQLATSKQEVQKMKNQQDEIFEELQMVKDQSSALINQISESQCTATEFEEKIISAVDLLISFREKRDRLRIEHANAAREVQVLRKFGEADTSFSYQVEFPAFSFLEINEATHDFDPSWKIGEGRYGSVYKGLLRNMHVAIKMLPSYGRERLSEFQHQVEVLSRVRHPNLLTLIGSCAESRSLVYEYINNGSLESHLARKEKNPLPWQIRISVATDICSALIFIHSSKPCIIHGNLKPSKVLLDANFVAKLSDLGIPSLVQQSLHSADASTVCNNPNERLAYVDPEYFVSGKFTPESDVYSFGVILLQLLTGRPLLGLVRDMKCALEKENLKAVLDLSAGEWPLYQTELLAYLALRCCEKSWLNRPDLVSEIWSVLEPFKATRIDKSYLISKKLHRVPSHFVCPIVQEVMEDPYIAADGFTYEAEAIRGWLNSGHDTSPMTNLKLDHTDLVPNYALHNAILEWQQQ
Length642
PositionTail
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.08
Grand average of hydropathy-0.299
Instability index40.12
Isoelectric point5.78
Molecular weight73016.56
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33304
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.23|      43|      85|     255|     297|       5
---------------------------------------------------------------------------
  255-  297 (75.42/47.96)	REVQVLRKFGEADTSFSYQVEFPAFSFLEINEATHDFDP.SWKI
  342-  385 (71.80/45.34)	RHPNLLTLIGSCAESRSLVYEYINNGSLESHLARKEKNPlPWQI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     123.84|      37|     127|     435|     474|       6
---------------------------------------------------------------------------
  435-  474 (56.93/50.18)	LVQQSLHSADASTVCNNPNERLayVDPeYFVSGKFTPESD
  565-  601 (66.91/46.25)	LISKKLHRVPSHFVCPIVQEVM..EDP.YIAADGFTYEAE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33304 with Med32 domain of Kingdom Viridiplantae
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