<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33296

Description Uncharacterized protein
SequenceMQRYHAGSCTSAVNNTAIGGQSTRDIGRTDSSSLPANFPLSSRRQPLLTPYKLKCDKEPLNSRLGPPDYHPQTPNCPEETLTREYLQSGYRDTVEGLEESREISLTQVPNFNKAIVLNCKEAIKKRLRAINESRVQKRKAGQVYGVALSGSQLAKPGVFPEQRPCSEDIRKKWIEGLSQQHKRLRSLADLVPHVRRKSLLEVLIRNNVPLLRATWFIKVNYLNLVRPGSASIPSGTGDKTQLTCSELWTKDVIEYLQTLLDEFFSKNTSHFTPHNRDRSPQVPYTASHQHRSDQLSVSDGEEPSLHFRWWYIVRLLQWHHAEGLLIPSLIIDWVLRQLQEKQLLEIWQLLLPIVYGFLEIVVLSQTYVRTLAGVALRVIRDPAPGGSDLVENSRRAYTTSALIEMLRFLILGAPETFVALDCFPLPSSILSYTINDGNFILKATEAAGKIKNSSEDVVCLFKSKGFDAQYQSLAFDHVISCIQERVQDLTKAVKPGYPGQYLAKAAQALDKSLVLGDLHGAYTFLFEDLCDETVSEGWVVKVSHCLRLSLKWFRTVNTSLIYSVFFLCEWATCDFRDFRTAPCDVKFTGRKDLSQVHIAIRLLKMKLRDMEVSPRQKSGNTRGRGVSYLGKCSGQQSNRNIVKNVSKTKSSSRSMDQNICSSAIFESPGPLHDIIVCWIDQHMVHKGGGLKRLHLLVVELIRAGIFYPLAYVRQLIVSGIMDMNVIDLEKQKRHCRILKQLPEKFVRDALVESGVNAGPQLTEALQIYLNERRLILRCSLWENHGNASNVNISSLKQNQCISSTKDRASTVSTDQWKSVLSSKTASKNGKDDNGVEDLKTFISALLQLPKSLSNLSSTGTDESQGNVRKPIGSQSKIDLVETTPGCEECRKSKRQKLSAERSLFVQAPSPVLSDDEDTWWAKKGLKSSEPLKVDQPLKPIKQVTKTRQKTVRKTQSLAQLAASRIEGSQGASTSHMCDNKVSCPHHRTAMNGDTARCVDGIQSIECEDIVSIGKALKQLRFVERKEITLWLLTVIRQLIEESEKVVGKVSQFGRPFATVDDKSSIRWKLGEDELSALLYLMDVSDDLVSAVKFLLWLLPKVYSSPSTTIHSGRSVLMLPRNVENQACDVSEAYLLSSLRRYENILAAADLIPEALSSIMHRAAAIMASNGRVSGSGALAFGRHLLKKYGNVVSVSEWEKNFRSTCDKRLASEIESGRSVDGELGLPLGVPAGVEDPDDFFRQKISGGRLPSRVGSGMRDVVQRNVEEAFHYLFGKDRKLFAAGTPRGPAFEKWDNGYQIAQQIVVGLIDCIRQTGGAAQEGDPSLVTSAVSAIVGSVGPTLAKLPDFSAGSNHSTMSLATSSLNYAKCILRMHITCLCLLKEALGERQSRVFEIALAMEASTALAGVFAPSKASRAQFQMSPETHDTGTIPGDVSNNSSKIVVARTTKISAAVSALVVGAIISGVMSLERMVTILRLKEGLDVVQFVRSSRSNSNGSVRTVGAFKVDSSVEVHVHWFRLLVGNCRTICEGLVVDLLDEPSIVALSRMQRMLSLSLVFPPAYSIFSFVMWRPFVMNANVAVREDMNQLYQSLTMAISDALKHLPFRDVCLRDCQGLYDLMAGNTTDAEFATLLELNGSDIHSKSVAFIPLRARHFLNAMIDCKMPQSVYTKDEGSRNSGHGESKIDFTDSESTLQDKLVNVLDALQPAKFHWQWVELRLLLNEQALIEKMKMHDISLADAIQLSSPSLEKSGASENENNFIEIILTRLLVRPDAAPLFSEVVHLFGKSLEDSMLLQAKWFLAGQDVLFGRKTIRQRLINIAESKRFSVKTQFSEPWGWCSPCKVPVTLKGNKKKVDSMPLEEGEVVEEGMDVKRSIKGFYPMFESESSTSKQQHGTERALLELILPCIDQSSDESRNSFASDLIKQLNYIEQQIAVVTRGPTKPVNTPVTEGQTNKVNSRKTIRSGSPGLARRPTPAPDSSPLSPAALRASISLRVQLLMRFLPIICTDGESSVRSMRYTLASVLLRLLGSRVVHEDAMVNAMQYSPLRKEAESPAEAAFVDSSVECLFDRLLLILHGLLSSSLPSWLRSKHVTKTANEPAREFSGFDREPLEALQNHLDNMQLPDTIRWRIQAAMPVLPPSIRCTFSCQLPTVPTSALASLQPNTTNSWFNSSSSTVPQRNLVPSSRTTSSGKSKQQDNDLDIDPWMLLEDGAGSCPSANNTNIIGSGDRVNIRAASWLKGAVRVRRTDLTYVGAVDEDS
Length2260
PositionKinase
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.07
Grand average of hydropathy-0.227
Instability index50.93
Isoelectric point8.86
Molecular weight250853.50
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33296
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      96.45|      20|      20|      39|      58|       1
---------------------------------------------------------------------------
   39-   56 (27.01/13.03)	..PLSSR.RQPLLTPYKLKCD
   57-   77 (36.51/20.36)	KEPLNSRlGPPDYHPQTPNCP
  868-  887 (32.92/17.59)	RKPIGSQ.SKIDLVETTPGCE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.57|      13|      21|     303|     322|       4
---------------------------------------------------------------------------
  303-  317 (21.42/33.32)	PSLHFRWwyIVRLLQ
  327-  339 (25.15/ 9.48)	PSLIIDW..VLRQLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.36|      12|      22|    1880|    1891|       5
---------------------------------------------------------------------------
 1880- 1891 (20.57/13.36)	PMFESESSTSKQ
 1905- 1916 (21.79/14.72)	PCIDQSSDESRN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.16|      20|     101|    1836|    1856|       6
---------------------------------------------------------------------------
 1836- 1856 (35.87/23.78)	GWCSPCKVPVTlKGNKKKVDS
 1939- 1958 (37.29/20.46)	GPTKPVNTPVT.EGQTNKVNS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.11|      19|     194|     189|     229|       7
---------------------------------------------------------------------------
  193-  217 (29.41/65.23)	HVRRKSLlevlirNNVPLLRATWFI
 1782- 1800 (35.69/11.34)	HLFGKSL......EDSMLLQAKWFL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.25|      25|     194|    1484|    1531|       8
---------------------------------------------------------------------------
  541-  569 (40.73/11.30)	KVSHCLRLSLKWFRTvntsLIYSVFFLCE
 1505- 1529 (46.52/ 8.31)	KVDSSVEVHVHWFRL....LVGNCRTICE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.16|      15|      19|     487|     501|       9
---------------------------------------------------------------------------
  487-  501 (28.63/16.66)	QDLTKAVKPG.YPGQY
  507-  522 (21.54/10.73)	QALDKSLVLGdLHGAY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     291.51|      98|     628|     570|     689|      10
---------------------------------------------------------------------------
  570-  689 (139.93/160.43)	WAtcdfRDFRTApCDVKF.....TGRKDLSQVHIAIRlLKMKLRDMEVSPRQK.SGntrGRGVSYLGkcSGQQS..NRNIVKNVSKTKSSSRSMdqnicssaiFESPGP..............LHDIIVCWIDqhMVHKGGG
 1197- 1316 (151.58/106.71)	WE....KNFRST.CDKRLaseieSGRSVDGELGLPLG.VPAGVEDPDDFFRQKiSG...GRLPSRVG..SGMRDvvQRNVEEAFHYLFGKDRKL.........FAAGTPrgpafekwdngyqiAQQIVVGLID..CIRQTGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      24.27|       9|      20|    1016|    1026|      12
---------------------------------------------------------------------------
 1016- 1026 ( 9.60/12.09)	LKQLrfVERKE
 1035- 1043 (14.67/ 7.85)	IRQL..IEESE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     242.21|      74|     528|    1533|    1613|      13
---------------------------------------------------------------------------
 1533- 1613 (118.91/92.89)	VDlldePSIVALsrMQRMLsLSLVFPPAYSIFSFVMWRPFVMNANVAVRE................DMNQLYQSLTMAISDALKHLPFRDVCLRDCQ
 2060- 2149 (123.30/77.44)	VD....SSVECL..FDRLL.LILHGLLSSSLPSWLRSKHVTKTANEPAREfsgfdreplealqnhlDNMQLPDTIRWRIQAAMPVLPPSIRCTFSCQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.62|      22|      24|    1997|    2018|      15
---------------------------------------------------------------------------
 1997- 2018 (39.69/28.96)	L...LMRFLPIICTDGESSVRSMRY
 2020- 2044 (31.93/21.60)	LasvLLRLLGSRVVHEDAMVNAMQY
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33296 with Med12 domain of Kingdom Viridiplantae
Unable to open file!