<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33293

Description Uncharacterized protein
SequenceMAVVSPVPATSQRMGSVRSPSDASGEILEEPNPGVVDQPIYVAVTKEVKESKLNLIWAIQHSGGKRICILYVHVRATMIPLLGGKFPANALREEQVQAYWEEEKQGMHRTLDEYLQICRRMGVQEEKLHIEMDSIEKGIVELVSQHDIRKLVMGAASDKYYNRKMMDLRSKKAIYVCKQAPASCHIQFICKGHLIHTRDQSLNEGNVEVASPLVQQVPNSVRTFRSQSVTLGQDRRANLTNHALEFLRRVRSVSDGHGASFPAVSSPEETEGFSTPRDRMGTEVSSDESDRLSRMSPSGLSMCSDSAVELATPRLITERSENALELTLSQLVIEDLHHSSPPSTVQDSGIDDTIYDQLQQAMAEAEDASLTAYKETVRRRNAEKEAIEAIRKAKASESLYREELNLRKLAEEELRKEKEDLENAKSLRDKVREELHLALDQKASLESQIASSELIIKELEQKIVSAVDLLQSYKNEREELQIQRDNALREAEDLRKKQGEASSSHVPQFFSEFSFSEIKEATNNFNPSLKIGQGGYGSIFKGVLSYTEVAIKMLHSDSMQGPLEFQQEVDVLSKLRHPNLITLIGACPDAWALVYEYLPNGSLEDRLACKDNTPPLSWQTRIRVATELCSALIFLHSSKPHSIVHGDLKPSNILLDANLISKLSDFGICRILSNYESSSRNSTQFWKTDPKGTFVYMDPAFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVKYALDTGKLKSLLDPLAGDWPFVQAEQLARLALRCCDMNRKSRPDLYSDVWRILDAMRVSSGGTNSFGLSSEGLSQHPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDGGNDNSPMTNSKLAHHNLVPNRALRSAIQDWLQNH
Length883
PositionTail
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.06
Grand average of hydropathy-0.419
Instability index52.14
Isoelectric point5.82
Molecular weight98852.86
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33293
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     158.76|      52|     263|       2|      54|       1
---------------------------------------------------------------------------
    2-   54 (82.54/61.13)	AVVSP.....VPATSQRMGSVRSpSDASGEILEEPNPGV...VDQPIYVAVTKEVKESKLN
  263-  322 (76.23/50.82)	AVSSPeetegFSTPRDRMGTEVS.SDESDRLSRMSPSGLsmcSDSAVELATPRLITERSEN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.79|      24|      29|     368|     394|       4
---------------------------------------------------------------------------
  368-  394 (33.76/22.53)	ASLTAYKETVRRRnaeKEAIEAIRKAK
  395-  418 (39.03/19.34)	ASESLYREELNLR...KLAEEELRKEK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33293 with Med32 domain of Kingdom Viridiplantae
Unable to open file!