<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33287

Description Uncharacterized protein
SequenceMDLDDFRSILDTSGVDVWMFIDAAIAVASADCAAELKRRRDSIVESLYSATAAPPRCRNCDDGHLLRTNGHQITKQNSPSPSPVRQPHRRRAAEAANSPATPQSLENDDGGEDLDPYGGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWVKLKPQGGRDTLMADGDSPVQKTTQNGHHHQIPDFAYSPNPHNGSSGSDRNNSEAEHKPKVIPRSEPRPKPTPAPSISTPASASQNRQRDSSFDAERLASARRRLQENYKEAENAKRQRTIQVMDINELPKSKPKNAFFGKNKGGGGSQGRHW
Length353
PositionUnknown
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.05
Grand average of hydropathy-1.002
Instability index61.39
Isoelectric point6.85
Molecular weight39480.34
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33287
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     149.81|      27|      27|     215|     241|       1
---------------------------------------------------------------------------
   55-   81 (31.41/15.32)	....PRCRNCDDGHllrtnGHQ..ITK.QNSP.SP
   83-  102 (27.02/12.15)	PVRQPHRRRAAEA...............ANSPaTP
  215-  241 (49.94/28.71)	DGDSPVQKTTQNGH.....HHQ..IPDFAYSP.NP
  243-  271 (41.43/22.57)	NGSSGSDRNNSEAE.....HKPkvIPRSEPRP.KP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.80|      11|      27|     103|     113|       3
---------------------------------------------------------------------------
  103-  113 (19.98/12.57)	QSLENDDGGED
  133-  143 (19.83/12.42)	EQLEEPDQSED
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33287 with Med26 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KPQGGRDTLMADGDSPVQKTTQNGHHHQIPDFAYSPNPHNGSSGSDRNNSEAEHKPKVIPRSEPRPKPTPAPSISTPASASQNRQRDSSFDAERLASARRRLQENYKEAENAKRQRTIQVMDINELPKSKPKNAFFGKNKGGGGSQGRHW
2) RNCDDGHLLRTNGHQITKQNSPSPSPVRQPHRRRAAEAANSPATPQSLENDDGGEDLDPYGG
204
58
353
119










Molecular Recognition Features






MoRF SequenceStartStop




1) KPKNAFFGKNKG
2) SQGRHW
333
348
344
353