<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33276

Description Uncharacterized protein
SequenceMQRYHAGSCTSAVNNSAIGGPSARDTGRSDSPSLPANFSVSSRRQPPLNSYKLKCDKEPLNSRLGAPDFHPQTSNCPEETLTREYLQSGYRDTVEGLEEAREISLTQVPHFNKNVVLNCKEAIRKRLRAINESRAQKRKAGQVYGVALSGSQLSRSGIFPELRPCGEDFQKKWIEGLSQQHKRLRSLADHVPHGYKRASLLDVLIRNNVPLLRATWFIKVTYLNQVQPGSVGISSGTADKIQLSRSDVWTKDVINYLQALLDEFLSKNVSHSASHARERSPQMPGSLQNKSDPLSSVSDGEGPSLHFRWWYIVRLLQWHHAEGLLHPSLAIDWVFNQLQEKDLLEVWQLLLPIIYGFLETIVLSQTYVRTLAGLALRVIRDPAPGGSDLVDNSRRAYTTCAVIEMLRYLILVVPDTFVALDCFPLPSSVISHAMNDGNFVLKSTEAAGKVKNSSDDFGHIISCIQKHTEDLAKASIPGAPGHCLAKVAKALDKALVLGDLRVAYKFLFEDLCGGTVSEGWVAKVSPCLRLSMKWFGTVSTSLIYSVFFLCEWATCDFRDFRGTRPRDIKFTGRKDISQVHVAVRLLKMKIRDVKISLKQTNEYHGASRFAKTNQQPNWNYVGKVSRLKSSSKSTGSSVIFESPGPLHDIIVCWIDQHVVHKGEGSKRIQLFIVELIRAGIFYPLAYVRQLIVSGIMDGNVNLVDMERRRRHYHILKQLPGCFIHDVLEESGIVEGAQLKVALQIYLNERHLILRGPLSESHDDASGSNLSALKRKKYPASMKDEASGMAIDQRNVISITKNTKNNANIEELRTAISVLLQFPNCSSNLSATGCDESEGSVRRPIGSQYSKNDPVEGTPGCEECIRTKRQKLSEERNSFVQGNSPVQSDDDDTWWLKKGMKSPEPLKVDQPQKSTKLVTKSRQKNVRKTQSLAQLAASRIEGSQGASTSHVCGSKVSCPHHKTAMDVDGQRSVDSIRTSHFGDIVSIGKALKQLRFVEKRAIAIWLLTVVRQVIEEMDKNVGKVGQFGRPFSVADDKSSIQWKLGEDELSAILYLMDISHDLVSAVKFLLWLLPRVLNSPNSTIHSVRNVLMLARNVENQVCDVGEAFLLSSLRRYENILVAADLIPEALSSAMRRAATIIASNGRVSGSGALAFARYLLRKYSTVASVIEWEKTFKATCDARLSSELDSCRSVDGELGLPLGVPAGVEDHDDFFRQKISGGRLPSRVGAGMREVVQRNVEEAFHCLFGKDRKLFAAGTLKGLPPVEKWDNGYQIAQQIVMGLIDCIRQTGGAAQEGDPSLVSSAVSAIVGSVGPTLAKMPDFSSGNNHSNITSASNLLNYARCILRMHITCLGLLKEALGERQSRVFDIALATEASTALAGVFTPSKASRAQFQTYPEVHESSNTISNDMGNNSNKVVVAKTTKIAAAVSALFVGAIIHGVTSLERMVTVLRLKEGLDAVQFVRSTRSNSNGNARSVMAFKMDNSIEVHVHWFRLLVGNCRTICEGLVVELLGEPFIMALSRMQRMLPLNLVFPPAYSIFAFVRWRPFILNATVREDMNQIYQSLVVAITEAIKHLPFRDVCFRDCQGLYDLMAADNSDSEFASLLEFNGSDMHLKLTAFVPLRSRLFLNAIIDCKMPQSIYAKDDGSRISGPGESKVQLTDSGSKLQDMLVHVLDTLQPAKFHWQWVVLRLLLNEQALIEKVENHDVPLSDAIKLSSPSPEKAASASENENNFIQILLTRLLVRPDAAPLFSELIHLFGRSVEDSMLLQAKWFLGGQDVLFGRKAIRQKLHNIAVNKKLSVKTQFWEPWGWCSPSTDSSTIKGENKKFDSTSLEEGEVVEEGTDLKRCQQQVIERALIELLLPCIDQSSDEAHNSFATDLVKQLSFIETHITAVTGGSKPVGSAPPGVEGQPNKVNNRKNMRTGSTALARRPTVAADSSPPSPAALRASMSLRLQLLLRFLPILCTDREPSVRSTRQFLASVIFRLLGSRVVHQDAGISANAVPLPMREAESSSEVASVDSSSQSLFDRLLLVLHGLLSSYPPSWLRPKPSKTSNEPTIDREWLETLQNDLDRMQLPDTVRWRIQAAMPILIPSMRCSLSCQPPSVSNSALMCIQPSTTNPGVNSSSSTIPQRNPALSRVASNASGKPKRQDNDLEIDPWTLLEDGAGSFPLPGNTASIGSGDHVNIRAASWLKGAVRVRRTDLTYVGAVDDDS
Length2215
PositionKinase
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.07
Grand average of hydropathy-0.211
Instability index48.58
Isoelectric point8.92
Molecular weight244745.11
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33276
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     223.81|      69|     150|    1351|    1425|       1
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 1351- 1425 (105.67/87.77)	CLGLLKEALGErqsrVFDIALA.TEASTALAGVFTPSKASRAQFQTYPEVHESsnTISNDMGNNSNKVVVAKTTKI
 1504- 1573 (118.13/81.16)	CEGLVVELLGE....PFIMALSrMQRMLPLNLVFPPAYSIFAFVRWRPFILNA..TVREDMNQIYQSLVVAITEAI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     421.02|     135|     558|     617|     770|       2
---------------------------------------------------------------------------
  626-  770 (210.52/155.10)	RLkSSSKSTGSSVIFESPGPLHdiIVCWIDQH......VVHKGEGSKRIQLFIVELIRAGI...FYPL.AYVRQLIVSGIMDGnvnLVDMERRRRHYHILKQLPGCFIhDVLEESGiveGAQLKVALQIYLNERHLIL..RGP.LSESHDDASGSNLS
 1182- 1329 (210.50/114.19)	RL.SSELDSCRSVDGELGLPLG..VPAGVEDHddffrqKISGGRLPSRVGAGMREVVQRNVeeaFHCLfGKDRKLFAAGTLKG...LPPVEKWDNGYQIAQQIVMGLI.DCIRQTG...GAAQEGDPSLVSSAVSAIVgsVGPtLAKMPDFSSGNNHS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.80|      29|     147|     236|     264|       3
---------------------------------------------------------------------------
  236-  264 (50.72/29.78)	GTADKIQLSRSDVWTKDVINYLQALL....DEF
  385-  417 (46.08/26.43)	GGSDLVDNSRRAYTTCAVIEMLRYLIlvvpDTF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.92|      28|     582|     266|     293|       4
---------------------------------------------------------------------------
  266-  293 (51.18/27.24)	SKNVSHSASHARERSPQMP.GSLQNKSDP
  825-  853 (46.75/24.26)	SSNLSATGCDESEGSVRRPiGSQYSKNDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     247.09|      78|     582|    1029|    1111|       5
---------------------------------------------------------------------------
 1029- 1111 (122.98/95.61)	PFSV..ADDKSSIQWKlGEDELSailyLMDISHDLVSA.VKFLLWLLPRVLNSPNSTIHSVRNVLMLARNVENQVCDVGEAFLLSS
 1638- 1718 (124.10/82.66)	PQSIyaKDDGSRISGP.GESKVQ....LTDSGSKLQDMlVHVLDTLQPAKFHWQWVVLRLLLNEQALIEKVENHDVPLSDAIKLSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.67|      24|     507|    1443|    1467|       6
---------------------------------------------------------------------------
 1443- 1467 (36.63/26.29)	SLeRMVTVLRLKEGL..DAVQFVRSTR
 1952- 1977 (37.04/21.84)	SL.RLQLLLRFLPILctDREPSVRSTR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33276 with Med12 domain of Kingdom Viridiplantae
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