<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33273

Description Uncharacterized protein
SequenceMQTVSRWKLPEFRKSFMKKCLEGLVKQSGLPLTRLSGVVQHLQRYEVKLNAAANNEVEYCHWLSQKVKEVLTQLMNAESKLCHSNSTASVEVFSAQEAGKSSNIDWKEQAYQKLGSSPQGSNTVILEKLRKKIKKTEFVLALFRMKKCQITTDIQKILDTIEDFIQASFFPKNVSSNQQGGKHLGDEKSRQQSDSSRSSISPLKIIEMKPSQQVLGTQNYHIRKDVSQENKLCLEEQQLKIIETKPSPQVLGTQNYPIWKDVSQQNKICLKEQQVKIIETKSSPQALGTQNYHIWKDVSQQNKICLKEQQVKIIETKSSQQALGTQNYHIWKDVSQQNKICLKEQQVKIIETKPSPQALGSQNYNTWKDVSQQNKICLKEQQVEKQYGNSTQHVNQVSIMKGPDNALQKQAQGSRKATEAFSVSVNSPGISSSPLTENCHKLKEISHKSSLTFDEPSAEVKHLLKVLSHISPEASRAALSEIREVVYLNDVMPTSEFLNGPPKMVQQQNQPGLFGQTGENLASNIEPFSQARYMTCHDFVPTGRKRSNSMNTVPSFYTSRISDSSCHSFNQLSDAEQPDWTSVTCKKKKPRIVENSSLLQEIKEINNRLIDTEIVMAENDSFNKAPGVAAEDSEGLVIEFLFNAVSVNKNLLSHISADKKPIIEPLRLVVPTNYPISSPVIVDKKLSEVSTEGQKDLSTIAKSKLRYSLHCLDHQTWSLKDIAMSWERCARETVIECAKAFGGGTFSSIYGGWENCQNTV
Length760
PositionTail
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.06
Grand average of hydropathy-0.592
Instability index58.98
Isoelectric point8.94
Molecular weight85611.35
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33273
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     351.11|      33|      33|     285|     317|       1
---------------------------------------------------------------------------
  204-  239 (60.23/36.05)	KIIE..mkpsqQVLGTQNYHIRKDVSQENKLCLEEQQL
  240-  275 (72.61/44.93)	KIIETK..pspQVLGTQNYPIWKDVSQQNKICLKEQQV
  276-  311 (74.09/45.99)	KIIETK..sspQALGTQNYHIWKDVSQQNKICLKEQQV
  312-  347 (74.09/45.99)	KIIETK..ssqQALGTQNYHIWKDVSQQNKICLKEQQV
  348-  383 (70.09/43.12)	KIIETK..pspQALGSQNYNTWKDVSQQNKICLKEQQV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     354.59|     116|     127|     422|     547|       2
---------------------------------------------------------------------------
  422-  512 (112.52/88.40)	........................................SvsvNSPGI..SSSPLTE.NCHKLKEISHKSSLTFDE.PSAEVKHLLKVLSHISPEASraALSEIREV.VYLND...VMPTSEFLNGPPKmVQQQNQPG
  513-  635 (168.10/117.59)	LFG..QTGENLASNIEPFSQARYMTCHDFVPTGrkrsnsmN...TVPSF..YTSRISDsSCHSFNQLSDAEQ..PDW.TSVTCK...KKKPRIVENSS..LLQEIKEInNRLIDteiVMAENDSFNKAPG.VAAEDSEG
  641-  714 (73.97/43.73)	LFNavSVNKNLLSHISADKKPIIEPLRLVVPTN................ypISSPVIV.D.KKLSEVSTEGQKDLSTiAKSKLRYSLHCLDH...............................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.59|       9|     127|       9|      20|       3
---------------------------------------------------------------------------
    9-   20 (14.84/18.44)	LPEFRksfMKKC
  140-  148 (18.75/11.60)	LALFR...MKKC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.43|      18|      21|      54|      71|       6
---------------------------------------------------------------------------
   54-   71 (33.47/20.94)	NNEVEYCHWLSQKVKEVL
   76-   93 (30.97/18.87)	NAESKLCHSNSTASVEVF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33273 with Med15 domain of Kingdom Viridiplantae
Unable to open file!