<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33270

Description Uncharacterized protein
SequenceMPSNALHFSTQPPHLMAMDDYECDEKVHVAVGKSLKKDTTLIQWCFTHFSSAHICLLHVYRPSTMIPTLLGKLPASQASPEVVSAYRIEEREDSKRLMEKYLSLCRAAKVKVTSIIGEADQVQKGIVDLVTVHNIRKLVIGAITPENCMKLKRNSSKANFAVKNVPPFCEIWFVYKGKHIWTREASETPCFVSSHAQPETTTAESLSCRSFQYGTNELFHSECLQSNSTRTTRSTVPNEIIEAEATFSSKSSSCNSYCSPQHSASPHIDTHSEPEEEKIDSQLIEAKAEANAATDKALVELFKCKRLEFKAIEAINKVDFFESAHAHEVKLRKEVGDAMSATIQEQRMFLEEKEEISRELERTTRSISLLENCVHEINSKLDEATHELSLIQASSSNLQHEKQEIRRQKMEALHWLERWKSCGHVGADHCIIGFSEEFPELAEFSLSDLQNATCNFSESFKAMEGGYGSIYKGEMLGRTVAIRKLHSHNMQGSAEFHQEVRVLGSIQHPNLVTLLGVCPEAWSFVYEYYPNGSLQDYLSRKGSLLPLTWTIRVRWISEIARALCFLHSSRPETIIHGGLTLETVLLDTGLSCKICDFGFSRLVKEESLSLPCFHLSTEPKGSFSYIDPELQRTGVLTPKSDVYSFGLIILQLLTGRTPVGLAGEVRRAISCGKLSSILDSSAGEWNSTGATRLAELGLQCCQLNSRDRPELTPSLVRELKQLYVSEERPVPPFFLCPIFQEIMHDPQVAADGFTYERKAIREWLEYGHETSPMTNLKLSYLHLTHNNALRFAIQDWLCKS
Length800
PositionTail
OrganismPhaseolus vulgaris (Kidney bean) (French bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Phaseolus.
Aromaticity0.08
Grand average of hydropathy-0.300
Instability index48.52
Isoelectric point6.12
Molecular weight90164.70
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33270
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.10|      18|     564|     163|     180|       1
---------------------------------------------------------------------------
  163-  180 (39.43/21.88)	KNVPPF..CEIW.............FVYKGKHI
  728-  760 (24.67/11.33)	RPVPPFflCPIFqeimhdpqvaadgFTYERKAI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.50|      22|     164|     421|     447|       2
---------------------------------------------------------------------------
  421-  447 (37.88/30.73)	SCghvgaDHCIIGFS....EEFPELAEFSLS
  591-  616 (39.62/20.82)	SC.....KICDFGFSrlvkEESLSLPCFHLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.84|      31|      47|     327|     359|       3
---------------------------------------------------------------------------
  327-  359 (44.60/35.62)	HEV..KLrKEVGDAMSaTIQEQRMFLE.EKEEISRE
  375-  408 (43.24/25.53)	HEInsKL.DEATHELS.LIQASSSNLQhEKQEIRRQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.93|      19|     371|     181|     200|       6
---------------------------------------------------------------------------
  181-  200 (32.55/24.59)	WTREASETPCFVSShAQPET
  555-  573 (36.38/22.11)	WISEIARALCFLHS.SRPET
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33270 with Med32 domain of Kingdom Viridiplantae
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