<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33250

Description Serine/threonine-protein kinase SSN3
SequenceMFQWRNWGKDIVCHATCGAAGPDRSQRFASRAANLTFAPGPDASGARRATACLSMSLTNPPSSTGGPLTVSSVRPVSQNLTKRSVQATFDDPLDQRRTPTSGYTSKVRVREKYHIIGFISSGTYGRVYKAIRRNGQKGEFAIKKFKPDKEGELIQYTGLSQSAIREMALCSELCHANVVGLEEIILEDKCIFMVFEYTEHDLLQIIHHHTQPQRHPIPAPMVRSILFQLLNGLLYLHSNWVLHRDLKPANILVTSSGAVRIGDLGLARLFYKPLNSLFSGDKVVVTIWYRAPELLLGSRHYTPAVDLWAVGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMMKIMEVLGLPRKEQWPGLVSMPEYPQLQNLALSRGAGHFNKPSNLEGWYQSCLKNGGYSQSSTAGTPGADGFDLLSRLLEYDPTKRITAREALEHPYFKNGGPISANCFEGYEGKYPHRRVSQDDNDIRTGSLPGTKRSGLPDDSLVGRPPKRLKD
Length500
PositionKinase
OrganismByssochlamys spectabilis (strain No. 5 / NBRC 109023) (Paecilomyces variotii)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Thermoascaceae> Byssochlamys.
Aromaticity0.09
Grand average of hydropathy-0.396
Instability index45.59
Isoelectric point9.42
Molecular weight55758.20
Publications
PubMed=24407650

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33250
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      71.92|      16|      43|     397|     412|       1
---------------------------------------------------------------------------
  397-  412 (28.19/19.86)	LKNGG.YSQSSTAGTPG
  442-  458 (24.86/16.51)	FKNGGpISANCFEGYEG
  472-  486 (18.87/10.49)	IRTGS.LPGTKRSGLP.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.74|      21|      50|      25|      48|       2
---------------------------------------------------------------------------
   25-   48 (31.84/28.56)	SQRFASRAANLTFapgPDASGARR
   77-   97 (36.90/23.06)	SQNLTKRSVQATF...DDPLDQRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      70.26|      25|      47|     258|     282|       3
---------------------------------------------------------------------------
  271-  318 (22.45/10.31)	YKPLNSLFSGDKvvvtiwyrapelllgsrhytpAVDLWA.VGciFAELL
  319-  357 (17.53/ 6.55)	..SLRPIFKGEE......akmdskktvpfqrnqMMKIMEvLG..LPRKE
  358-  378 (30.27/16.28)	QWP..GLVSMPE.....................YPQLQN.LA..LSR..
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33250 with CDK8 domain of Kingdom Fungi
Unable to open file!