<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33227

Description Protein kinase
SequenceMSELVRPSGYFYDDTDDPFAGAFWSQFQDPHDLAARHVPTDSSPAAAMKAYREYRDRVRKPVLATYTILGFLSSGTYGRVYKARLRNAPGTASGSGNVGANGAAVASGSGTGAASGSTTAVKKRGGLLQQHQMLDSPSAASSMHATPKSALDGSATGHGTPIGSPSLTASLTAPTSNPAGRTDNTQLTGVIPDSQIYAIKKFKPDTKETDATIYTGISQSAMREISLNRELSHVNIVTLHQVMLEDKAIYMVFEYAEHDLLQIIHYHSTALRAPIPVAVLKSLLWQLINGVAYLHANWILHRDLKPANILVTSAGVVKIGDLGLARLYSSPLQSLYNGDKVVVTIWYRAPELLLGARHYTTAIDMWSIGCIWGELLALRPMFKGEEAKMDPKTKAAPFQTDQLKRIVEVLGTPNKDRWPSIESMPDYKGWWPHLRLDNYAKTLPRWYASRHKADDGYELFDRLLQYDPEQRLTATQSLTHPWFAESPTPTSNAFVSLTKPTATYPNRRVIQDDLDPKMRSNYQPPIETHHLASAPHRLAQLLHQQESLRHQAMHPTSTAVPVAPMVGGPAAPPPLAIPTGGAGAGAPSTGPTVTNPVITIGSTGGPPSVRSSVASDTETPSGGARGERENLVAKATRNQQRKRQRV
Length646
PositionKinase
OrganismKalmanozyma brasiliensis (strain GHG001) (Yeast) (Pseudozyma brasiliensis)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Ustilaginomycetes> Ustilaginales> Ustilaginaceae> Kalmanozyma.
Aromaticity0.07
Grand average of hydropathy-0.373
Instability index47.72
Isoelectric point9.34
Molecular weight70204.64
Publications
PubMed=24356824

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33227
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.20|      15|      15|     559|     573|       1
---------------------------------------------------------------------------
  559-  573 (29.17/13.60)	AVPVAPM.VGGPAAPP
  576-  591 (23.03/ 9.23)	AIPTGGAgAGAPSTGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.77|      12|      90|     246|     271|       2
---------------------------------------------------------------------------
  233-  244 (20.86/32.03)	H..VNIVTLHQVML
  258-  271 (16.91/ 8.97)	HdlLQIIHYHSTAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.35|      14|      17|     468|     481|       3
---------------------------------------------------------------------------
  468-  481 (25.65/17.38)	PEQRLTATQSLTHP
  487-  500 (25.70/17.42)	PTPTSNAFVSLTKP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.45|      16|      25|     114|     138|       4
---------------------------------------------------------------------------
  104-  119 (24.45/10.87)	AVASGSG.........TGAASGSTT
  120-  144 (21.00/25.19)	AVKKRGGllqqhqmldSPSAASSMH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.63|      21|      25|     178|     199|       5
---------------------------------------------------------------------------
  178-  199 (34.32/22.96)	PAGR.TDNTQLTGvIPDSQIYAI
  204-  225 (33.31/17.93)	PDTKeTDATIYTG.ISQSAMREI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.17|      14|      17|     604|     617|       6
---------------------------------------------------------------------------
  604-  617 (25.34/18.37)	GGPPSVRSS.VASDT
  622-  636 (19.83/12.45)	GGARGERENlVAKAT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.25|      16|      25|      52|      70|       7
---------------------------------------------------------------------------
   52-   70 (23.56/23.22)	REYRDRVRKpvlATYTILG
   79-   94 (28.69/18.08)	RVYKARLRN...APGTASG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33227 with CDK8 domain of Kingdom Fungi
Unable to open file!