<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33217

Description Uncharacterized protein (Fragment)
SequenceMFPQFDESVPPNSTAVAIDRDKNSPHAVRWAIDHLIISNPLIILLHIRQKYNHQNSNGGYVESDSEMQQLFTPFRGYCARKGVLLKEVVIDDNDISKAILEYIGRNLLSNIVVGASTRNALARKFKGVDISTTVMKSAPDFCSVYIISKGKILSVRTAQRPAANTAAPPRQPSPGIPPQIPSDHGELDDPFRGQGMRGIPRGLATERLSWEKGSTPIRAAAHDRHRSSPSTLALDTIESTLPGRRSTGRDSFSDESDYSGPLGMGSLDISSKNLDFSSVPVSPRVSSASQSSRDLEAEMRRLKLELRQTMEMYSTACKEALNAKKKAKELNQWKMEEAQRFEEARMAEETALAIAEMEKAKCRAAIEAAEKAQKLADAEAQRRKQAELKAKREAEEKNRALTALANNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQILTARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESCAKLAIQCAELRKKDRPDLGTVIVPDLNRLKDLGRKLESNKSY
Length705
PositionTail
OrganismCitrus clementina
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.06
Grand average of hydropathy-0.456
Instability index44.18
Isoelectric point8.84
Molecular weight78363.60
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33217
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     116.99|      34|      49|     345|     378|       1
---------------------------------------------------------------------------
  311-  336 (20.85/ 9.40)	................EMYSTACKEALNAKKKA.KELNQwkmE
  345-  378 (55.96/36.96)	RMAEE.....TALAIAEMEKAKCRAAIEAAEKA.QKLAD...A
  392-  429 (40.19/24.58)	REAEEknralTALANNDVRYRKY..TIEEIEEAtDKFSE...A
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.94|      30|     116|      53|      83|       2
---------------------------------------------------------------------------
   53-   83 (53.36/35.03)	HQNSNGGYVESDSEMQQLFTPFRGYCARkGV
  170-  199 (59.58/35.19)	RQPSPGIPPQIPSDHGELDDPFRGQGMR.GI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     134.90|      41|     172|     260|     302|       3
---------------------------------------------------------------------------
  260-  302 (63.64/46.52)	GPLGMGSldISSKNLDFSSVPVSPRVSSASQSSRDLEAEMRRL
  433-  473 (71.26/45.99)	GEGGYGP..VYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.10|      17|     201|      15|      33|       5
---------------------------------------------------------------------------
   15-   33 (25.40/24.79)	AVAIDRDKNSPHAVrwAID
  219-  235 (30.70/20.13)	AAAHDRHRSSPSTL..ALD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33217 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GLATERLSWEKGSTPIRAAAHDRHRSSPSTLALDTIESTLPGRRSTGRDSFSDESDYSGPLGMG
2) TAQRPAANTAAPPRQPSPGIPPQIPSDHGELDDPFRGQGMRGIP
202
157
265
200










Molecular Recognition Features






MoRF SequenceStartStop




NANANA