<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33205

Description Uncharacterized protein
SequenceMKMKNKALAILLLFALPAADDTTTKLGTVIGIDLGTTYSCVGVYRNDHVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAAFNPERTIFDVKRLIGRKFDDPEVQRDIKFLPYKVVNKDGKPYIQVKVKGETKVFSPEEISAMVLQKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKEGEKNILVYDLGGGTFDVSILNIDDGVFEVRATRGDTHLGGEDFDHRVMDYFIKLIKKKYSRDISNDNKALGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNLDLFKKTMGPVKKALEDARLKKTDIDEIVLVGGSTRIPKVQQLLKDLFDGKEPNKGVNPDEAVAYGATVQGGILSGEGGKDLLLLDVTSLSLGIETVGGVMTTLIPRNTGIPTKKSQVFSTYQDQQSTVTIKVYEGERSLTKDCHELGRFDLSGIPPAPRGVPQIQVTFDVDANGILHVTAEDKAAKNKQSITITNDKGRFSEEEIQRMVKEAEEYAEKDKNARERIDSRNKLESYIYNMRSTINDNDNNKLADKIDSDDKEKIESTLKEALEWLDDNQNAGKDDFDEKLKEVEAVCNPVIKEVYEKGGESSSAADYSEDEEPDDDL
Length655
PositionUnknown
OrganismCitrus clementina
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.06
Grand average of hydropathy-0.529
Instability index33.73
Isoelectric point5.11
Molecular weight72823.36
Publications









Function






Annotated function


GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33205
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      74.21|      16|      26|     576|     591|       1
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  546-  560 (18.40/ 7.38)	EKDKNArERIDS..RNK
  576-  591 (27.86/14.83)	DNNKLA.DKIDSDDKEK
  604-  619 (27.95/14.90)	DDNQNA.GKDDFDEKLK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.08|      17|      21|      58|      75|       2
---------------------------------------------------------------------------
   58-   75 (28.07/21.21)	NR..ITPSWVAFtDTERLIG
   80-   98 (27.01/15.44)	NQaaFNPERTIF.DVKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.36|      24|      31|     341|     369|       4
---------------------------------------------------------------------------
  341-  369 (33.14/31.43)	KALEDARL..KKTDIDEIVLVGGStripkVQ
  373-  398 (37.22/22.39)	KDLFDGKEpnKGVNPDEAVAYGAT.....VQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.99|      22|     287|     167|     199|       5
---------------------------------------------------------------------------
  161-  183 (31.74/38.52)	KIKDAVVTVP.AYFNDaQRQATKD
  194-  216 (31.25/11.97)	RIINEPTAAAiAYGLD.KKEGEKN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     153.34|      50|     391|     104|     154|       6
---------------------------------------------------------------------------
  104-  154 (80.44/55.73)	PEVQ..RDIK...FLPYKVVNKDGKPYIQVKVKGETKVFSPEEISAMVlQKMKETA
  491-  545 (72.90/45.96)	PQIQvtFDVDangILHVTAEDKAAKNKQSITITNDKGRFSEEEIQRMV.KEAEEYA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33205 with Med37 domain of Kingdom Viridiplantae
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