<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33185

Description Uncharacterized protein
SequenceMKIKNKALSILLLFAFEFSLALAAADDTTKLGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTIFDVKRLIGRKFDDPEVQRDIKFLPYKIVNKDGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSGEGGDETKGILLLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIYNMRSTINDKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQVYEKNGGSSSADSEDEEPNDEL
Length657
PositionUnknown
OrganismCitrus clementina
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.06
Grand average of hydropathy-0.442
Instability index31.93
Isoelectric point5.22
Molecular weight72889.97
Publications









Function






Annotated function


GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33185
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.96|      14|      22|     576|     597|       1
---------------------------------------------------------------------------
  556-  569 (20.87/ 6.06)	DKKVRERVDSRNK..L
  581-  596 (18.09/17.80)	NDKLADKIDSDDKerI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      83.59|      22|      22|     101|     122|       2
---------------------------------------------------------------------------
   78-   98 (21.10/11.23)	LIGEAAKNQaalNAERTI.........FDV
  101-  122 (38.81/27.16)	LIGRKFDDP...EVQRDIK.....FLPYKI
  125-  147 (23.68/13.55)	KDGK....P...YIQVKVKgetkvFSPEEI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.08|      14|      15|     412|     425|       3
---------------------------------------------------------------------------
  412-  425 (23.58/15.79)	GDETKGILLLDVAP
  429-  442 (24.49/16.69)	GIETVGGVMTKLIP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.98|      15|     290|     172|     188|       5
---------------------------------------------------------------------------
  172-  188 (22.09/20.95)	VTVPAYfnDAQRQATKD
  465-  479 (25.89/16.22)	VTIKVY..EGERSLTKD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33185 with Med37 domain of Kingdom Viridiplantae
Unable to open file!