<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33183
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MGELGQQTVPFSTLVSRAAEDSFASLKELVEKSKTGEESDTDKKINLLKYIVKTQQRMLRLNVLAKWCQQVPLIHYSQQLASTLSSHDTCFTQAADSLFFMHEGLQQARAPIYDVPSAIEVFLTGSYQRLPKCIEDMGMQSTLTKDQQKAALKKLDTLVRAKLLEVSLPKEISEVKVSSGTALLRVDGEFKVLVTLGYRGHLSMWRILHLELLVGERSGPVKLEESRRHVLGDDLERRMSAADNPFITLYSILHELCVALVMDTVIRQVQALRQGRWKDAIRFELISDGSMGHGASGSSIQPNQDGEVDSAGLRTPGLKLIYWLDFDKNPGSSDSGSCPFIKIEPGPDLQIKCLHSSFVIDPLTGKEAEFALDQSCIDVEKLLLRAISCNRYTRLLEIQKELGKNIQICRAPSDVVLQSFMDELDADNRKKDNKSEFRDYEGQEVLRVRAYGSSFFTLGINIRNGRFLLQSSHKILAPSVLSDCEEALNQGSTSAAEVFISLRSKSILHLFAAIGRFLGLEVYDHGFASMKVPKNLVNGSTVLLMGFPDCGSSYFLLMELDKDFKPMFKLVETQPDQSEKGQSSSDLNRVIRIKQIDISQMQILEDELNLSILNQGNLLSVMPNADGANHTSEQGLISEFNLDGSMHIAGCPLSSFSSVVDEVFEFEKGPAASSYTLQNVSSSFTTSSASHFGSLQMNLHGVKAGTPSPRWEGGVQMSHLNVAKGSIGNTQYNGSLYSSSNVKGPVQSSSFSSLSSGLARSTAVKKLPASKSDQDLASLRSPHSVEIGTVEEDLVSVGRSSRLLSPPRTASVRAPPPSAKPNGPRSSVTGSLAGSIKVAGSSSLASPPVSHAADTDIVSKHDKHPRKRTVSDMLSLIPSLQDIEAATGLSNKRRKISESAHFQQPLSGGLISAEIVSKAERYSYGNLVAEANKGNAPSSTYISALLHVVRHCSLCIKHARLTSQMELLDIPYVEEVGLRSASSNIWFRLPFARGYTWRHICLRLGRPGSMHWDVKINDQHFRDLWELQKGSNSTPWGSGVRIANTSDIDSHIRFDPEGVVLSYQSVEDDSIKKLVADIQRLANARMFALGMRKLLGVRADEKPEEGTANFDVKAPVGGKGASEASDKLSEQMKRAFRIEAVGLMSLWFSFGSVVLARFVVEWESGKEGCTMHVSPDQLWPHTKFLEDFINGAEVASLLDCIRLTAGPLHALGAATRPARAGTGPGVPGVATAVSTIPKQTGYSSSQGLLPNGSTTNVSQVTSAPTGLNVSQVTSASTGNPVGAASTVPLGNPNLHGAAMLAAAGRGGPGIVPSSLLPIDVSVVLRGPYWIRIIYRKHFAVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQELNGLDSNITGGQQTVGMANTNPSSGSQLASANGSRVNIPSSAAMSRAVNQVAALNRVGNPMPGSSNLSVVSSGLPIRRSPGASVPAHVRGELNTAIIGLGDDGGYGGGWVPLVALKKVLRGILKYLGVLWLFAQLPDLLKEILGSILKDNEGALLNLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHQQQQQQQQQNSSTAQEELTQSEIGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQTQGGEIAPSQKPRIELCLENHSGFNVDDGSVNSSASKSNIHYDRPHNSVDFALTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGENPNVSFLGMEGSHGGRACWLRTDEWEKCKQRVARVVEVNPVSAGDLTQGRLRIVADSVQRTLHMCLQGLKDGGTVTASSVGV |
Length | 1820 |
Position | Tail |
Organism | Citrus clementina |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.165 |
Instability index | 45.51 |
Isoelectric point | 8.12 |
Molecular weight | 197169.08 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP33183
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 353.38| 109| 162| 1243| 1357| 1
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1243- 1357 (176.90/101.41) SSSQGLLPNGSTTNVSqvTSAPTGLNVSQVTS.ASTGNPVGAASTVPLGNPnlhGAAMLAAAGRGGPGIVPSSLLPIDVSVVLRGPY...WIRIIYRKHFAVDMRCFAGdQVWLQPATP
1408- 1520 (176.48/87.43) SGSQLASANGSRVNIP..SSAAMSRAVNQVAAlNRVGNPMPGSSNLSVVSS...GLPIRRSPGASVPAHVRGELNTAIIGLGDDGGYgggWVPLVALKKVLRGILKYLG.VLWLFAQLP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 210.81| 59| 158| 973| 1032| 2
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973- 1032 (110.11/73.00) VEEVGLRSASSNIWFRLPF.....AR.GYT..WRHIC.LRLG.RP..G.SMHWDVKiNDQ...HFRDLWELQKGSN
1066- 1113 (37.58/18.26) VEDDSIKKLVADIQ.RLAN.....AR.MFAlgMRKLLgVRADeKPeeG.TANFDVK....................
1138- 1193 (63.12/36.24) IEAVGLMS....LWF..SFgsvvlARfVVE..W......ESG.KE..GcTMHVS...PDQlwpHTKFLEDFINGAE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.17| 14| 72| 668| 689| 3
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676- 689 (22.27/ 6.37) TLQNVSSSFTTSSA
750- 763 (21.90/11.64) SFSSLSSGLARSTA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.10| 26| 36| 504| 530| 4
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504- 530 (41.64/35.50) SKSILHLFAAIGR..FLGLEVyDHGFASM
540- 567 (44.46/31.73) STVLLMGFPDCGSsyFLLMEL.DKDFKPM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 242.35| 59| 259| 617| 675| 5
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301- 339 (25.87/10.04) QPNQDG..EVDSAglrTPGlkL.IYWLDF.DknpGSSDSGSCP...........................................
622- 695 (92.71/59.35) MPNADG..ANHTS...EQG..L.ISEFNL.D...GSMHIAGCPLSSFSSVVDEVFEFEKGPAASSYtlqnvsssfttssasHFGSL
696- 749 (52.50/29.69) QMNLHGvkAGTPSprwEGG..VqMSHLNVaK...GSIGNTQYNGSLYSS..SNV....KGPVQSS.....................
823- 876 (71.27/43.53) .....G..PRSSV...TGS..L.AGSIKV.A...GSSSLASPPV.SHAADTDIVSKHDKHPRKRTV..............sDMLSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.05| 12| 36| 130| 141| 6
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130- 141 (23.49/16.07) LPKCIEDMGMQS
168- 179 (19.56/12.06) LPKEISEVKVSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 248.08| 84| 1170| 386| 477| 9
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386- 477 (119.36/112.20) AISCNRYTRLLEI.......QKELGKNIQICRAPSDVVLQSFMDELdADNRKKDNKSEfrDYEGQevlRVRAYgSSFFTLGINIRNgRFL.LQSSHKILA
1558- 1649 (128.72/89.90) AVSVHRVQLLLQVlsvkrfhQQQQQQQQQNSSTAQEELTQSEIGEI.CDYFSRRVASE..PYDAS...RVASF.ITLLTLPISVLR.EFLkLIAWKKGLA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.34| 20| 1354| 342| 361| 11
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342- 361 (38.10/25.82) KIEPGPDLQIK.CL..HSSFVID
1655- 1677 (29.24/17.89) EIAPSQKPRIElCLenHSGFNVD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.22| 13| 1354| 288| 300| 13
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288- 300 (25.24/14.87) DGSMGHGASGSSI
1678- 1690 (22.98/12.76) DGSVNSSASKSNI
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