<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33182

Description Uncharacterized protein
SequenceMANQSKEMMEEESCLLSAAAFEERVIETAKRCQQRHDSPVMWAVEMTRCLKSGSGSVVELGEVLVSYLCFQNNHPSLWKFLDYALTSNLLSPIHILSLLTSRVIPHRRSQPQAFRLYLELLSRYALNFHAVASEDCNVKIIESVDACLQLSRTYNVRVVEFGHALVLSFFDLVVRLIDSLFEDMGLQVGSLDQQSMEIDSIGNFSVGNNEHFEQIRRKNSLLVIEVLNKLMDSSKAMVLIRLIHFNMPESFNGLLQRLQFLEANKLESSKLKTVSQLLARLCDNVRNVPSYDYKLNKHRFIGMLIDTKSLRPMRSCNSESSWSSCWLSFDIFMENSMDGKQLPVTSAIIVLTRIITTLRVLNRASWQETFLALWLSALRLVQRERDPPEGPLPHLEARLGILLSIVPLAIANVLAEQANIQLSTLQGSKTSGSIETGCGHGMEEKSLASKKEGLVSSLQALGNFSALLCPPASVACEANNAAAKAASFISVSKNMKDGICSGSPSETLLNSGGNMRHLIVEACIARNLIDTSAYYWPGYVSASVIAVNEFSPVQKSPWSMFMEGAPLNGSLVNLLFSTPASSLAEIEKLYHIALTGSAEERSAAAKILCGASLARGWNIQEHVVRFVVKLLSPPIPPGYTGPRSHLVDHMPMLTAIFFGASSVDTVHILSLHGLVPDVVASLMPLCEVFGSLVPTSSSKSSTGDEPSVYMVFSCAFLFLVRLWKFYRSPHELCLSGGTLAGELTLEYLLLLHNSHIASRTSAAQSERNSNLDQLDTVSDDPIYIDHFPKLRAWYCQNKTCIASTLSGLCSGNPVHQVANKILSMIYSKMTKTGASSSNSSTPPSGSASESPACIGEDAYQRPMLPAWEVLEAIPFVLEAILSACAYGRLSSRDLITGLRELVDFLPASIATIISYFSAEISRGIWKAVPMNGTDWPSPAPMLPSIESEIKEILAAVGVSVPCCSAGTSPLTLPLPVAVLVSLTITFKLTKSLDYIHAVIGPALENCAAGCSWPCIPIIGSLWAQKVRRWHDFIVVSCSRSVFWKNQEAVSQLLRSCFTSFLGSLHVSSLLTNQSSVNNLLGSDVAARAVCPSLAPGYLYLRSCRTIHNVQHVNDVIVGLVAEFAREAAAKWASSDLPRLKSSQASLSLATSKAREVASLGASLLCATAGLQVVQELYRETIPTWLLSSRDEKLGKVSAVAHIMEGYAMAYMWVLSGGLIWGFEAKMPSWAVSRRRYLIGTHFEYLSRALEGNIKLGCDPATWRAYVSCLVGLVVSSAPAWIQEVKPETLRKLASGLRGWHECELALSLLERGGIGSIPSVMELLHVIN
Length1328
PositionTail
OrganismCitrus clementina
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.07
Grand average of hydropathy0.173
Instability index51.99
Isoelectric point6.90
Molecular weight145252.32
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33182
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     228.22|      73|      97|    1118|    1195|       1
---------------------------------------------------------------------------
 1118- 1195 (105.53/76.87)	GLVAEFarEA.AAKWASSDLPRLKSSQasLSLaTSKARE.VASLGASLLCATAGLQVVQELYRETIPTWLLSSRDEKLGK
 1217- 1291 (122.69/73.65)	GLIWGF..EAkMPSWAVSRRRYLIGTH..FEY.LSRALEgNIKLGCDPATWRAYVSCLVGLVVSSAPAWIQEVKPETLRK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.94|      20|      97|      49|      70|       2
---------------------------------------------------------------------------
   49-   70 (31.76/27.78)	CL...KSGSGSVVELGEVLVsyLCF
  147-  169 (32.18/20.26)	CLqlsRTYNVRVVEFGHALV..LSF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.95|      23|      46|     952|     974|       4
---------------------------------------------------------------------------
  952-  974 (41.44/21.33)	ILAAVGVSVPCCSAGTSPLTLPL
  995- 1017 (46.50/24.84)	IHAVIGPALENCAAGCSWPCIPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     250.98|      61|     135|     647|     707|       5
---------------------------------------------------------------------------
  607-  645 (53.54/24.10)	.........ILCGASL..ARGWNI.QEH.VVRFVVKLLSPPIPP.GYTGP....RSH......
  647-  707 (103.34/52.74)	VDHMPMLTAIFFGASS..VDTVHILSLHGLVPDVVASLMPLCEVFGSLVPTSSSKSSTGDEPS
  784-  844 (94.09/47.42)	IDHFPKLRAWYCQNKTciASTLSGLCSGNPVHQVANKILSM..IYSKMTKTGASSSNSSTPPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.17|      14|      75|     855|     868|       8
---------------------------------------------------------------------------
  855-  868 (29.43/16.28)	GED.AYQRPMLPAWE
  932-  946 (23.74/11.74)	GTDwPSPAPMLPSIE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33182 with Med33 domain of Kingdom Viridiplantae
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