<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33170

Description Uncharacterized protein
SequenceMAAKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQDLLLLDVTPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQGDGGDVPMGGGYGSSGSGGSGAGAGPKIEEVD
Length650
PositionUnknown
OrganismCitrus clementina
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.06
Grand average of hydropathy-0.405
Instability index32.55
Isoelectric point5.44
Molecular weight71109.71
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33170
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.42|      36|      41|     289|     329|       1
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  289-  324 (64.62/54.11)	EID.SLYEGIDFYATITR.ARFEELNMDLFR.....KCMEPVE
  331-  373 (47.80/26.97)	KIDkSLVHDIVLVGGSTRiPKVQQLLQDFFNgkelcKSINPDE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     151.18|      51|      60|     385|     442|       2
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  385-  442 (70.47/63.83)	ILSGEgDQKVQDLLLLDVTPLSlGIETAG.GVmttliPR.NTTVPAKKEQVFSTYADNQT
  448-  500 (80.71/51.44)	VYEGE.RARTKDNNLLGTFELK.GIPPAPrGV.....PQiNVCFDIDANGILHVSAEDKT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.85|      18|      21|      38|      55|       3
---------------------------------------------------------------------------
   16-   33 (18.49/ 8.79)	....TTYSCVGVWQNDRveIIA
   38-   55 (32.65/20.41)	NR..TTPSYVAFTDTER..LIG
   60-   78 (24.72/13.90)	NQvaMNPQNTVF.DAKR..LIG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     192.48|      63|     397|     102|     169|       4
---------------------------------------------------------------------------
  102-  169 (97.50/71.98)	GDKPMIVVTykGEEKRFSPEEISSMVLTKMKEIAEaylGHAVKNAVVTVPAYFN..DSQRQATKD...AGAIA
  502-  569 (94.98/57.00)	GVKNQITIT..NDKGRLSKEDIERMVQEAEKYKAE...DEQVKKKVEAKNKLENyaYSMRNTVKDdkvAGKLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.75|      10|      25|     206|     215|       5
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  206-  215 (19.09/12.76)	LGGGTFDVSL
  234-  243 (19.67/13.41)	LGGEDFDNRL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33170 with Med37 domain of Kingdom Viridiplantae
Unable to open file!