<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33142

Description Uncharacterized protein
SequenceMWMAKNNNVGNKEGGGSSGVVAVAIDKDKSSQHALKWAVDHLLQRGQSVILVHVKLRPSPLTNSPSLHASSAKLSQDSSLVCRDPEGASKEIFLPFRCFCTRKDIQCQDVLLEEYDVAKALVEYANQAAIEVLVVGSSNKGGFLRFNKPTDIPGTIAKTAPDFCTVYVISKGKISTMRSASRSAPTTAPLRSPIQPPSLKPPQPVPSTSTNMRAERRSFESQQRRSMEEQQRRSMEDQQRRSMEDQQRRSMEDQSESFRSPFTRRGYGRSYGDLSVPESDISFVSSGRPSIDRIFPNIYDNNDPNRTPPRLSNFSDMDYSPSIDQSSNYGRRSVDISSPTDYSSGSFDSNERFSSASAMDDVESEMRRLKLELKQTIEMYSTACKEALTAKQKATELQRWKLEEERKLEEARLAEEAALAIAEKEKAKSKAAMEAAEAAQRIAELEAKKRVNAEMKALKESEEKTKALTALANSDVRYRKYSIEEIESATEFFAEKYKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPECGCLVYEFMANGSLEDRLFRLGNSPPLSWQMRFRIAAEIGTGLLFLHQAKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITAKPPMGLTHYVERALEKGTLADLLDPAVSDWPLEDTAEFAKLALKCAELRRKDRPDLAKVILPELNRLRTLAEESTQSVQFINSPGPSPTGSQNSLKLEQLGGASISVPQ
Length801
PositionTail
OrganismEutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Eutremeae> Eutrema.
Aromaticity0.07
Grand average of hydropathy-0.504
Instability index61.25
Isoelectric point7.48
Molecular weight89108.06
Publications
PubMed=23518688

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33142
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      83.11|      15|      15|     223|     237|       1
---------------------------------------------------------------------------
  195-  221 (19.84/ 9.10)	QPPSLKPPQpvpststnmraeRRSFES
  223-  237 (31.52/18.78)	QRRSMEEQQ............RRSMED
  239-  253 (31.76/18.98)	QRRSMEDQQ............RRSMED
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     180.97|      36|      36|     359|     394|       2
---------------------------------------------------------------------------
  317-  356 (44.29/24.42)	MDyspsiDQSSNYGRRSVDISSPTD.YSSGSFDSNE......RFSSA
  359-  394 (57.20/33.52)	MD.....DVESEMRRLKLELKQTIEMYSTACKEALT......AKQKA
  397-  431 (33.03/16.48)	L............QRWKLEEERKLEEARLAEEAALAiaekekAKSKA
  433-  467 (46.45/25.94)	ME.....AAEAAQRIAELEAKKRVNAEMKALKES.E......EKTKA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.43|      25|     139|     551|     575|       7
---------------------------------------------------------------------------
  551-  575 (47.47/29.23)	LLGACPECGCLVY..EFMANGSLEDRL
  689-  715 (38.96/22.80)	LITAKPPMGLTHYveRALEKGTLADLL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33142 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DRIFPNIYDNNDPNRTPPRLSNFSDMDYSPSIDQSSNYGRRSVDISSPTDYSSGSFDSNERFSSASAMDD
2) MRSASRSAPTTAPLRSPIQPPSLKPPQPVPSTSTNMRAERRSFESQQRRSMEEQQRRSMEDQQRRSMEDQQRRSMEDQSESFRSPFTRRGYGRSYGDLSVPESDISF
292
177
361
283










Molecular Recognition Features






MoRF SequenceStartStop




1) IDRIFPNI
291
298