<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33140

Description Uncharacterized protein
SequenceMVKSCEKREQNITLAIDRDKESQNALKWTVDNLLSRGQTLTLLHVKLKHPPSLPYSGSHPNRSSDDGTEIFLPFRCYCARKDVNCKDVIVEDFSAAQGILDYVQENAVETLVLGASRMTLLRFKAADVSSTVMKKAASFCTVYAISKGKISSMRSATASLRSSTMRQHVHAQTSYQNVERRQQTMQRTQEEIEIKRGYEGTYQPSITDSDISYVSSGRPSVDLMFPSFYDNVDNPRLSLSSDFEENRISFATSCSSDKQSIDLGSSYAAFSSSSLESGRQSCSLSSQDEIEAEMRRLKMELKYTMEMYNSACKEAISAKKAATELHKWKADKERKLEEVRLAKEAAMEMAESEKEKSRAAMEAAEAAQRIAEVEAQKRKHIENAEEKKREMHSLVKTSLRYRKYMIEEIEDATEDFSTSRKIGEGGYGPVYRGTLDYTQVAIKVLRPDAAQGRSQFQKEVEVLTCMRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRRGNTPILSWQLRFRIAAEIATGLHFLHQMKPEPLVHRDLKPGNILLDQHFVSKISDVGLARLVPPSVADTATQYRMTATAGTFCNIDPEYQQTGMLGTKSDVYSFGIMLLQILTVKPPMGLTHHVDKAIQNGTFAEMLDPAVPDWPLEEALVAAKLGLRCAELRRKDRPDLGNVVLPELNRLRALAEERMPPINFGGSQRPSPSRNRNNSHTQSPENISDPQLQYGSDNSSSHNNSTS
Length738
PositionTail
OrganismEutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Eutremeae> Eutrema.
Aromaticity0.07
Grand average of hydropathy-0.536
Instability index53.03
Isoelectric point6.81
Molecular weight82809.91
Publications
PubMed=23518688

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats
>MDP33140
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.50|      30|      39|     211|     249|       1
---------------------------------------------------------------------------
  211-  249 (39.66/46.01)	ISYvSSGRPSVDLmfPSFYDNVDnprlslSSDFEENRIS
  252-  281 (52.84/31.65)	TSC.SSDKQSIDL..GSSYAAFS......SSSLESGRQS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.16|      28|      29|     305|     333|       2
---------------------------------------------------------------------------
  305-  332 (49.34/35.43)	MEMYNSA...CKEAISAKKAATELHKWKADK
  347-  377 (39.83/22.36)	MEMAESEkekSRAAMEAAEAAQRIAEVEAQK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     152.97|      50|     566|      19|      73|       3
---------------------------------------------------------------------------
   19-   73 (78.67/63.96)	DKE.SQNALKWTVDNLLSRGqtLTLLHV.KLKHPPSLPYsgsHPNRSSDDGT..EIFLP
  587-  640 (74.29/47.45)	DPEyQQTGMLGTKSDVYSFG..IMLLQIlTVKPPMGLTH...HVDKAIQNGTfaEMLDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.64|      21|     351|      95|     115|       4
---------------------------------------------------------------------------
   95-  115 (35.98/23.90)	AAQGILDYVQENAVET........LVLGA
  449-  477 (28.66/17.73)	AAQGRSQFQKEVEVLTcmrhpnmvLLLGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.08|      23|      29|     121|     143|       6
---------------------------------------------------------------------------
  121-  143 (37.93/25.91)	LRFKAADVSSTVMKKAASFCTVY
  153-  175 (39.15/26.98)	MRSATASLRSSTMRQHVHAQTSY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33140 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AEERMPPINFGGSQRPSPSRNRNNSHTQSPENISDPQLQYGSDNSSSHNNSTS
2) HAQTSYQNVERRQQTMQRTQEEIEIKRGYE
3) RLAKEAAMEMAESEKEKSRAAMEAAEAAQR
686
170
340
738
199
369










Molecular Recognition Features






MoRF SequenceStartStop




NANANA