<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33130

Description Uncharacterized protein (Fragment)
SequenceMAVSADYQVQFPGSDEIYSILAAEGIEFLLSHSGEVPLEYILGKTICLFFSANWCRPCKDFTPELVRLYESLQKRGEELEVIFVSFDHDMTSFYEHFWCMPWLAAPFSLGLRNKLTDKYKIARIPSLVPLYPDEILVAEDVIGLIEDYGPEAYPFTKRRKEELKAIDDSKRVGGQLVKLLTHESRNYVVSRNGSKVLVSKLVGKTIGLYFGAHWCPPFRAFTSQLIDMYNELATTEKGSFQVILVSTDRDSGEFNINMSNMPWLAIPYEDRTRQDLCRIFNIKLIPALVIIGPEEKTVSTNAREMVSLYGSRSFPFTESRIVELEACLKKEGDSFPRKVKDKKHEHELKLDMARAYVCDFCKKQGRFWAFSCDACDYDLHPTLKRETWMARNRRERDGGGFGTDGLVAVAIDRDKSSQNALKWAVDNMLQRGSTVLLVHVKTRASSLSTNPSINSNPSKTSQINSDSSLVCGEPEGSIKQLYLPFRCLCSRKDIQCKDVLLEDSDVAKALVEYANQVIIEVLVIGSSSKGGFLRFNKPTDIPGIVTKTAPDFCSVYVVTKGKLSTKRIASRTAPSVSPLRIQLQQNSLKPHPPLPSTNTRAERQSFESQHRRSLDDQSDSFRYTSLLSPFTRRGLNGRSYGDLSLPDADISFISSGRPSTERNSSTSLYDNYDPNRTPPPRLSNFSDIDSGSFESMTNGRRSMDISSPTAFSTGSFETDRFSSASQVADIDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKATELQRWKMEEERKLEEAKNAEEAALAIVEKEKAKSKAAIEAAQRIAEIESRKRISAEMKALMESEEKTKAVNALAHADVRYRKYSIEEIEDATDYFDEKYKIGEGGYGPVYKCYLDHTPVAVKALRPDATQGRSQFQKEVEVLSCMRHPNMVLLLGACPECGCLVYEFMANGSLEDRLFRQGNTPPLSWQTRFRIAAEIGTVLLFLHQTKPEPLVHRDLKPANILLDRNFVSKLADVGLARLVPPSVANTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITGKPPMGLTHYVERALEKGNLKDLLDPAVSDWPVEDTTEFAKLALKCAEIRRKDRPDLSKVILPELNRLRTLAEESTQSAEQMSGTSMAVPQLTSEVS
Length1155
PositionTail
OrganismEutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Eutremeae> Eutrema.
Aromaticity0.08
Grand average of hydropathy-0.382
Instability index49.24
Isoelectric point6.56
Molecular weight129914.71
Publications
PubMed=23518688

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33130
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     122.78|      27|      41|      30|      57|       1
---------------------------------------------------------------------------
   30-   57 (49.98/40.81)	LSHSGEvPLEY...............................................I...LGKTICLFFSANWCRP
   72-  101 (44.91/31.18)	LQKRGE.ELEV...............................................IfvsFDHDMTSFYEHFWCMP
  145-  217 (27.90/16.27)	IEDYG..PEAYpftkrrkeelkaiddskrvggqlvkllthesrnyvvsrngskvlvskL...VGKTIGLYFGAHWCPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.14|      19|      28|     613|     633|       2
---------------------------------------------------------------------------
  613-  633 (29.55/23.13)	SLDDQSDSFryTSLLSPFTRR
  644-  662 (34.59/19.81)	SLPDADISF..ISSGRPSTER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      31.21|      10|      16|     786|     795|       3
---------------------------------------------------------------------------
  786-  795 (15.53/10.87)	EAALAIVEKE
  804-  813 (15.68/11.06)	EAAQRIAEIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     178.50|      55|     158|     102|     165|       4
---------------------------------------------------------------------------
  102-  165 (88.42/66.09)	WLAAPFSLGLRNKLTDKYKIARIPSLVPLYPDEILVAEDVIGLiedygpeayPFTKRRKEELKA
  263-  326 (90.09/67.50)	WLAIPYEDRTRQDLCRIFNIKLIPALVIIGPEEKTVSTNAREMvslygsrsfPFTESRIVELEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.91|      24|      44|     664|     689|       5
---------------------------------------------------------------------------
  664-  689 (40.25/30.55)	SSTSL.YDNYDPNRTPPPrlSNFSDID
  707-  731 (36.65/21.21)	SPTAFsTGSFETDRFSSA..SQVADID
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.12|      14|      30|     735|     748|       6
---------------------------------------------------------------------------
  735-  748 (23.32/14.95)	EMRRLKLELKQTME
  766-  779 (24.79/16.36)	ELQRWKMEEERKLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.92|      22|      32|     327|     349|       7
---------------------------------------------------------------------------
  327-  349 (35.83/28.06)	ClKKEGD..SFPRKVKDKKHEHELK
  361-  384 (38.09/24.90)	C.KKQGRfwAFSCDACDYDLHPTLK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.24|      18|      30|     829|     848|       8
---------------------------------------------------------------------------
  829-  848 (21.90/25.39)	EEKTKaVNALAHADVrYRKY
  861-  878 (35.34/26.63)	DEKYK.IGEGGYGPV.YKCY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     251.08|      86|     468|     488|     603|      11
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  488-  603 (109.60/149.32)	LCSRkDIQCKDVLLEDSDVAKaLVEYanqviievlvigssskgGFLRFNKPTdIPGIVTK.....TAPDFCSV...YVVTkGKLSTKriasRTAPSVSPLRIQLqqnsLKPHPPLPSTNtRAER
  978- 1071 (141.48/100.63)	LVHR.DLKPANILLDRNFVSK.LADV.................GLARLVPPS.VANTVTQyrmtsTAGTFCYIdpeYQQT.GMLGVK....SDIYSLGIMFLQL....ITGKPPMGLTH.YVER
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33130 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LRIQLQQNSLKPHPPLPSTNTRAERQSFESQHRRSL
2) SFISSGRPSTERNSSTSLYDNYDPNRTPPPRLSNFSDIDSGSFESMTNGRRSMDISSPT
579
651
614
709










Molecular Recognition Features






MoRF SequenceStartStop




NANANA