<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33115

Description Uncharacterized protein
SequenceMKSQKGNSKKKNANSGLVAVAVDKDKGSQHALKWAADHLVSKGQTIILLHVLLRSSSDSVEVNAEKHKQAENLFVTFHCYCSRKEIQCLDVTLEDDNIVKSLAEYVSNGVIENLVLGAPSRHGFMRKFKMSDTPSNVAKAAPDFCTVYVISKGKISSVRHATRTAPYRSPLMGQIENHSAISNYEKFRNTMSFRDRTPARPSVSSSIEDYGKSPMARKSNYANSFFDLSDSENDISFVYSGRPSTTSSGRPSTTSSGRPSTTSRPSLSTNGRSDISFVSSGRPSTSTNGSPSFIYDFPDSGLTPRMSTGSGQSVGSMRLGIRFNDTNIQHDFSFVSQDSGRSSCSCSPQNLEEVEAEMRRLKQELKHTIDMYGSACREALAAKQEAKELQRQKMEEEGWVHEGQLSEKSTKSIVEKERANKAAMEASETASKIAELENQRRAMEAGGSFSDSSLRYRRYVISEIEEATNSFDKANKIGEGGYGPVFKGQLDHTPVAVKVLRQDAAQGRSQFQREVEVLSCIRHPHMVLLIGACPEYGMLVYEYMAKGSLADRLYRNGKTPPLSWELRFRIAAEVATGLLFLHQTKPEPIVHRDLKPGNILIDQNYVSKIGDVGLSKLVPAVAENVTQCHVTSTAGTFCYIDPEYQQTGMLGVKSDVYSFGILLLEMLTAKKPTGLAYTVEQAMEQGTFREMLDPAVPNWPVEEALSLAKIALRCAQLRRKDRPDLGKEVLPELNRLRALADANMEWILFNYSRGPSPNHSSVSLPPVDEMSVISDSSNTHSSTLSDTEKNLDENEED
Length797
PositionTail
OrganismEutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Eutremeae> Eutrema.
Aromaticity0.07
Grand average of hydropathy-0.513
Instability index47.91
Isoelectric point7.04
Molecular weight88098.14
Publications
PubMed=23518688

Function

Annotated function 
ECO:0000256	RuleBase:RU364060
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats
>MDP33115
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     202.76|      36|      38|     217|     252|       1
---------------------------------------------------------------------------
  163-  215 (32.38/13.24)	RTAPYR.SPL.......MGQIENHsaISNYekfrntmsfrdrT..PARPSVSSSiedyGKsPM
  217-  252 (67.56/34.77)	RKSNYA.NSF.....FDLSDSEND..ISFV............Y..SGRPSTTSS....GR.PS
  254-  268 (26.60/ 9.70)	TSS...........................................GRPSTTSR....PS.LS
  269-  291 (38.38/16.91)	T......N............GRSD..ISFV............S..SGRPSTSTN....GS.P.
  308-  348 (37.85/16.59)	TGSGQSvGSMrlgirFNDTNIQHD..FSFV............SqdSGRSSCSCS.......P.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.34|      37|      41|     369|     409|       2
---------------------------------------------------------------------------
  369-  405 (64.31/44.28)	IDMYGSACREALAAKQEAKEL.....QRQKMEEEGWVHEGQL
  413-  454 (53.02/27.44)	IVEKERANKAAMEASETASKIaelenQRRAMEAGGSFSDSSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     114.72|      34|      40|      20|      53|       3
---------------------------------------------------------------------------
   20-   53 (55.44/40.13)	VAVDKDKGSQHALKWAADHLVSKGQTIILLHVLL
   60-   93 (59.28/43.39)	VEVNAEKHKQAENLFVTFHCYCSRKEIQCLDVTL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33115 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FVYSGRPSTTSSGRPSTTSSGRPSTTSRPSLSTNGRSDISFVSSGRP
2) KQEAKELQRQKMEEEGWVHEGQLSEKSTKSIVEKERANKAAMEASETASKIAELENQRRA
3) NGSPSFIYDFPDSGLTPRMSTGSGQSVGSMRLGIR
4) NHSSVSLPPVDEMSVISDSSNTHSSTLSDTEKNLDENEED
237
383
288
758
283
442
322
797










Molecular Recognition Features






MoRF SequenceStartStop




NANANA