<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33105

Description Uncharacterized protein
SequenceMARYSSDDGHAPVNSTVVAIDKDKNSHYAVRWAVDHLFNLINNPNMILVHVRLKNSHHGGNNDNDDLNQLFVPYRGYCARKGISMTEVILEDTDVAKAVLDYVNNNLVNNIVLGSSSKNPFARSLKFTKSHDVAASILKSTPEFCSIYVISKGKVQSSRTAQRPITNTLVPPRAPSSTFHLQNLPDPDQDPVARVQRNARNTTLERHAHDNGFNAVRDRHKSPANGSLDFNHDFRQGKSQKNSMGRSSFSDESDVGTLMMGSIDLTAHNFDIVGGSGSSDESVNSQSNRDIEAEMKRLKIELRQTMDMYSSACKEALNAKKKANELNQWKMEEARRFEEARSAEEAALAVAEIEKAKCRAAMEAAEKAQRMAELEGQRRKQAEMKARRESQEKDRALSALVQNDVRYRKYSIEEIEEATDRFASNRKIGEGGYGPVYKGTLDHTPVAIKVLRPDAAQGKKQFQQEVEVLSCIRHPHMVLLLGACPEYGCLVYEFMENGSLEDRLFRRGNSPPLSWRKRFQIAAEIATALSFIHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPASVADTVTQYHMTSAAGTFCYIDPEYQQTGKLTTKSDIYSLGIMLLQVITAKSPMGLAHHVSRAIDKGTFKDMLDPSVTDWPVEEAITFAKLCLKCAELRKKDRPDLGKDIVPELVRLRSLGMNNESGK
Length699
PositionTail
OrganismEutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Eutremeae> Eutrema.
Aromaticity0.06
Grand average of hydropathy-0.552
Instability index43.20
Isoelectric point8.66
Molecular weight78159.66
Publications
PubMed=23518688

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33105
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.72|      28|      33|     162|     191|       2
---------------------------------------------------------------------------
  162-  191 (47.69/36.62)	QRPITNTLVPPRAPSSTFHlqNLPDPDQDP
  196-  223 (50.04/32.11)	QRNARNTTLERHAHDNGFN..AVRDRHKSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.67|      33|      34|     226|     259|       3
---------------------------------------------------------------------------
  226-  259 (55.08/44.65)	GSLDFN.HDFR.QGKSQKNSMGRSSFSDEsDVGTLM
  261-  295 (48.59/33.87)	GSIDLTaHNFDiVGGSGSSDESVNSQSNR.DIEAEM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.28|      17|      64|     301|     325|       6
---------------------------------------------------------------------------
  301-  317 (29.22/27.19)	ELRQTMDMYSSACKEAL
  332-  348 (26.06/ 8.31)	EEARRFEEARSAEEAAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.62|      21|      25|     354|     374|       8
---------------------------------------------------------------------------
  354-  374 (33.79/25.00)	EKAKCRAAMEAAEKAQRMAEL
  380-  400 (32.83/24.06)	KQAEMKARRESQEKDRALSAL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33105 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AAEKAQRMAELEGQRRKQAEMKARRESQEKDR
2) RTAQRPITNTLVPPRAPSSTFHLQNLPDPDQDPVARVQRNARNTTLERHAHDNGFNAVRDRHKSPANGSLDFNHDFRQGKSQKNSMGRSSFSDESDVGTL
364
159
395
258










Molecular Recognition Features






MoRF SequenceStartStop




NANANA