<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33102

Description Uncharacterized protein (Fragment)
SequenceMVKMVGRERRDENVVVAIDRDKGSQAALKWAVDNLLTPGENLTLVHVRLKQTLPLNATYHNKSRDDVKELFLPFRCFCTRKDINCEDVVLEDVDAAKGIIDYVQENAIDILVLGASKMTLLKRFKAADVTSTVMKGAASFCTVYAISRGKISSVRSATSSPPPLCTIRPKLPARPSKASSNNSHPRARLCQREADKTQEEIEIKYKHPHYLRRGYDQASVTDSDISFVSSDRPSMDWMFPTPRLSVSSEFEENRCSFAASSCSSEKQSLDLGSSYSAFSSSSQESGRLSSWSLHSQDDVEAEMRRLKMELKYTMEMYSTACKEAIAAKKTTTELHKLKEEREQKLEEARLAKEAAMAMAENEKEKSRAAMEAIATAHRIAEMETQKREQIETASLREAGDKNNVMYSLAKSDRRYREYTIAEIEEATEDFSDNHKIGEGGYGPVYKGTLDYTEVAIKVVRPDASQGRSQFQQELEVLTCIRHPNMVVLLGACAEYGCLVYEYMANGSLEDRILRRGNSPVLSWQLRFRIAAEIATSLNFLHQMKPEPLVHRNLKLANILLDHYMVSKIADVGLARLMPPAVSNTETEYRMTSTAGTMCNIDPEYQQTGILVTKSDIYSFGIILLQILTAKPPMSLTHKVQKAIEEGTFLGMLDPAVPDWPLEEALDLAKLGLQCAELRPKDRPILGKDVLPELKKLMDLAEESMPTMRPSPNSTQNNSRTNSLASTASIQ
Length730
PositionTail
OrganismEutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Eutremeae> Eutrema.
Aromaticity0.06
Grand average of hydropathy-0.437
Instability index52.10
Isoelectric point6.34
Molecular weight81758.41
Publications
PubMed=23518688

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33102
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.23|      13|     532|     171|     183|       2
---------------------------------------------------------------------------
  171-  183 (24.73/16.27)	LPA.RPSKASS.NNS
  704-  718 (18.49/10.09)	MPTmRPSPNSTqNNS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      85.06|      21|     201|     325|     345|       4
---------------------------------------------------------------------------
  325-  345 (30.44/18.63)	IAAKKTTTELHKLKEEREQKL
  349-  366 (26.98/15.71)	RLAKEAAMAMA...ENEKEKS
  367-  386 (27.63/16.26)	RAAMEAIATAHRIAEMETQK.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     179.19|      48|     416|     115|     162|       7
---------------------------------------------------------------------------
  115-  162 (77.87/46.96)	ASKMTLLKRFKAADVTSTVMKGA.ASF.CTVYA.ISRGKISSVRSATSSPP
  487-  519 (24.69/10.42)	..................VLLGAcAEYgCLVYEyMANGSLEDRILRRGNSP
  534-  579 (76.63/46.11)	ATSLNFLHQMKPEPLVHRNLKLA.NIL.LDHYM.VS..KIADVGLARLMPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.18|      13|      15|     263|     276|       8
---------------------------------------------------------------------------
  263-  276 (17.38/12.81)	SSEKQSLDLgSSYS
  280-  292 (21.80/11.37)	SSSQESGRL.SSWS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33102 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DLAEESMPTMRPSPNSTQNNSRTNSLASTASIQ
2) KTTTELHKLKEEREQKLEEARLAKEAAMAMAENEKEKSRAAMEAIATAHRIAEMETQKREQIETASLR
698
329
730
396










Molecular Recognition Features






MoRF SequenceStartStop




NANANA