<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33065

Description Uncharacterized protein
SequenceMTTPYSSDDIHSPVNSTVIAIDKEKQSHYAVRWAVDHLFTAIHNPFITLLHVRHKISNHGGNGANFNNDDLNQLFVPYRGYCARKGVILEDSDVAKAILDYVNNNLVNNLVLGSSSKNAFARTLMFSKPHEVQASILKSTPEFCSVYVISKGKVVSSRPAQRPITNTLAPPRVPSSGFLIQSLSDSEQDFVPRVQRSARRKSTEIYPHNRAFNTTQQRQINPKKNESTDFNNGFTQVSFQRKPTIQSSFSDESEGGLGMIGSIDLSAHNLDYYGASSSSDESIPQTTKDIEAEMRRLKIELKQTMDMYSSACKEALTAKRKANELNQWKIEEARKFEKARLSEEAALAVAEMEKAKCRTALEAAEKAQRMAELEGQRRKQAEMKARSEEEDKDRAMTALAHNDARYRRYTIEEIEEATERFGNHRKIGEGGYGPVYKGELDHTPVAIKVLRPDAAQGRKQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMENGSLEDRLLRRGNSQPLSWRKRFEIAADIATALSFLHHAKPEPLVHRDLKPGNILLDKNYVSKISDVGLARLVPASVADSVTQYHMTSAAGTFCYIDPEYQQTGKLTTKSDIYSLGILLLQIITAKPPMGLAHLVARAISRGTFKEMLDPVVSDWPLQEAQSFAILSLKCAELRKRDRPDLGKDVVPQLIRLKNLGNDADLSL
Length698
PositionTail
OrganismEutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Eutremeae> Eutrema.
Aromaticity0.07
Grand average of hydropathy-0.488
Instability index45.33
Isoelectric point8.59
Molecular weight78224.92
Publications
PubMed=23518688

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33065
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     147.72|      46|      49|     338|     386|       1
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  292-  334 (30.56/15.92)	............AEMRRLKielkqtmdmyssaCKEALTAKRKA.NELNQWKIE.......EAR
  338-  386 (64.31/54.51)	KARlsEEAALAVAEMEKAK.............CRTALEAAEKA.QRMAELEGQRRKQAEmKAR
  390-  429 (52.85/33.73)	EDK..DRAMTALAHNDARY.............RRYTIEEIEEAtERF....GNHRKIGE....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     141.87|      46|      49|     545|     593|       2
---------------------------------------------------------------------------
  545-  593 (73.77/57.72)	KPGNILLDKnyvSKISDVGLARLVPASVADSVTQYHMTSAA...GTF.CYIDP
  596-  645 (68.10/44.88)	QQTGKLTTK...SDIYSLGILLLQIITAKPPMGLAHLVARAisrGTFkEMLDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.36|      19|      20|     201|     219|       3
---------------------------------------------------------------------------
  201-  219 (34.11/25.53)	KSTEIYPHNRAFNTTQ.QRQ
  223-  242 (28.24/19.81)	KKNESTDFNNGFTQVSfQRK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.65|      33|      51|     434|     484|       4
---------------------------------------------------------------------------
  436-  473 (50.38/56.79)	YkGEL.....DHTPVAIKVLRPDAAQG...RKQFqqevEV.......LSCIRH
  486-  533 (43.27/13.53)	Y.GCLvyefmENGSLEDRLLRRGNSQPlswRKRF....EIaadiataLSFLHH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33065 with Med32 domain of Kingdom Viridiplantae
Unable to open file!