Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAAAMENGAPNGSAVHTNHDRDAKLSSPRKANGVNGDVGGADKMVNGDASTRAEPLTTETPTTSQSSRMNDLPDQIQHITTNYVPLGFLLQRLAQKTHNNLQDLIRELARKPVAGSGGASGTPPALPPGTEDGSIENIEKKKALLDFARSEHANWVKALVITEWSKKASQISKLIDLENHMFEEELVRYEQAVFTMLNLKRNLNAARVPSPDLKTALHVLSRGSAGWMPDLGFITPPPLNAQEQLKKLDDISTLLSLRLNLDDHDTIPYFFRNNYSIASGRVTFKVPGEFEVDLTLASDDFSQQLWFLDLRFLFTPAPRDLTPSLRKALEDRVNNVLGLEGLAGCYRMLHEYVLTHKINELRRQVKDLARGRWIDTVRAEQLNRAIAVQYWTSRHSGGNHYNSGAAAGPTGSNNAEVRSWFIIGVHSGRDAASADLPEEQITSRLTLRWFRDNKEVKDLGDGQISAILTTLSAENEETAEGQTHDDGSTPLSATVTLCAETVLQHIVALHVEHILTGIHTKLAAKPLFAKRLATMRLRISRTDASASFLEIQLTNAGDRIWVRIDPVTGLFSLSPQKSRVVTHSEMRINAAAAGGSLGGGSTGTGGDPVEEGFVMLDNVRNLAAQEDLGRRAKSFGWQVVRNTGPGGGHLVKPDELRQVLNLRDSYQVLWLKRPDWAAPQWHVLASLSLSGDRWWLVKLAEQPTSPPPVSGLPGPGQQQQGPAATSAARIVMQMLLPMGTSPSDLDDAFFSDLTIYATGVLAQYTDAHELSQRRKMAQATRVINPYLPSRAKLPAMSIRLSDLLSAGAAAITGSQPSTTTTTINNRSMIPSTNSRGRHGQAQRWWASDFLQLLFRGVDMDGDDETNSAAGERRRRIRVLAEARLTVLDRSKFRLLGNSSRTDQDVAFNSRTGQFCLYLRAAVGESVIDTLVRRLRSIERLVGFLDAIRRESRVVHIQTVSLSRLVFSYSVGPGSPLSLEEKQSLTTEAVAAATAAANSCGRWDVSVDLSSSAQVQLQLERGCPHLRVADFLNNVANDPTTFAAVPFFLTATLSLHRALDRIEDAWEGLVMRNAGMLGIFPRALDWYVVRFLIPPTPPPGAARPRVLVLELRLKNRRSELLWQIRRLDNNSPESTGAPVPAALANAAPASADDDLGKVVRRVFDGSGPGWKGLLTAAVASPYPEKNPEESASASASAGGTGKPARNTGSTGIEDCLLQIDEGVRQLLAGSFAAASNNAAAQQRRAQALAQAQAQAQAQAQAQAQAQAQAQQQNNGGSGGNGSSGGIPQAQTARMG |
Length | 1294 |
Position | Tail |
Organism | Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) (Rose-picker's disease fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Sordariomycetidae> Ophiostomatales> Ophiostomataceae> Sporothrix. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.322 |
Instability index | 46.44 |
Isoelectric point | 8.74 |
Molecular weight | 140409.67 |
Publications | PubMed=24855299 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP33001 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 57.17| 18| 22| 429| 446| 1 --------------------------------------------------------------------------- 429- 446 (30.54/15.00) RDAAS.ADLPEEQITSRLT 451- 469 (26.63/12.30) RDNKEvKDLGDGQISAILT --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 279.90| 95| 483| 115| 244| 3 --------------------------------------------------------------------------- 125- 244 (137.47/142.08) ALPPgTEDGSI..ENIEKKKALLDFARSEHA.NWvkaLVITEWSK......KASQISKLIDLENHMfeeelvryeqavfTMLNLKRNLNAArvPSpdlktaLHVLSR....GSAGWMPDLG..FITPPPLNA......QEQ 605- 720 (142.43/84.32) GGDP.VEEGFVmlDNVRNLAAQEDLGRRAKSfGW...QVVRNTGPggghlvKPDELRQVLNLRDSY.............QVLWLKRPDWAA..PQ......WHVLASlslsGDRWWLVKLAeqPTSPPPVSGlpgpgqQQQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 188.93| 59| 469| 714| 779| 4 --------------------------------------------------------------------------- 714- 779 (89.36/60.88) GPGQqqqgPAATSAARIVMQMLLPMGTSPSDLDDAFFSDLTIYATgvlAQYTDAHELSQRRKMAQA 1198- 1256 (99.57/58.96) GTGK....PARNTGSTGIEDCLLQIDEGVRQLLAGSFAAASNNAA...AQQRRAQALAQAQAQAQA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 39.10| 12| 468| 487| 502| 8 --------------------------------------------------------------------------- 471- 482 (19.56/14.92) LSAENEETAEGQ 491- 502 (19.54/ 6.24) LSATVTLCAETV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 99.52| 29| 776| 301| 335| 11 --------------------------------------------------------------------------- 306- 335 (48.96/32.89) WFLdLRFLFTPAPRDLTPSLRK.ALEDRVNN 1085- 1114 (50.56/20.65) WYV.VRFLIPPTPPPGAARPRVlVLELRLKN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 38.31| 10| 194| 963| 973| 12 --------------------------------------------------------------------------- 963- 973 (16.77/13.29) RLVFSYSvGPG 1159- 1168 (21.54/12.24) RRVFDGS.GPG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 41.81| 13| 19| 873| 885| 15 --------------------------------------------------------------------------- 873- 885 (20.31/13.62) RRRIRVLAEARLT 889- 901 (21.50/14.94) RSKFRLLGNSSRT --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 36.72| 10| 28| 388| 397| 17 --------------------------------------------------------------------------- 388- 397 (21.19/12.01) VQYW..TSRHSG 417- 428 (15.53/ 6.83) VRSWfiIGVHSG --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) PQAQTARMG 2) WYVVRFLI | 1286 1085 | 1294 1092 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab