<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32999
Description |
Cell differentiation protein rcd1 |
Sequence | MMPNAHLYGGHHQQYTPQDSAWMHPHQQQQAAVAAAQQQQQQQQQQQQQQQQQYSHIANRQHGAAGALGGVGVNAGVGAGAVAPGVGHGGPDGALDGVSEDNRRTMSYIADLLNENTREAALLELSKKREQVPELALILWHSFGVMTSLIQEIISVYSLLNPSQLTAAASNRVCNALALLQCVASHNDTRTLFLSAHIPLFLYPFLNTTSKSRPFEYLRLTSLGVIGALVKNDSSEVINFLLTTEIIPLCLRIMETGSELSKTVAIFIVQKILLDDNGLNYICATYERFYAVGTVLSNMVGQLVEQQTARLLKHVVRCFLRLSDNARAREALRQCLPEPLRDATFSSVLRDDAATKRCLAQLLINLSDNIVDAGSGHPSI |
Length | 380 |
Position | Tail |
Organism | Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) (Rose-picker's disease fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Sordariomycetidae> Ophiostomatales> Ophiostomataceae> Sporothrix.
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Aromaticity | 0.06 |
Grand average of hydropathy | -0.092 |
Instability index | 48.89 |
Isoelectric point | 6.49 |
Molecular weight | 41584.85 |
Publications | PubMed=24855299
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Function
Annotated function |
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GO - Cellular Component | CCR4-NOT complex GO:0030014 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | mRNA catabolic process GO:0006402 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP32999
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 81.10| 22| 22| 13| 34| 1
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13- 34 (41.52/24.67) QQYTPQDSAWMHPHQQQQAAVA
37- 58 (39.58/23.20) QQQQQQQQQQQQQQQQQYSHIA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 284.74| 95| 114| 159| 258| 2
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159- 258 (147.69/101.61) LLNPSQLT..AAASNRVCNALALL.QCVASHNDTRTLFLSAHIplfLYPFLNTTSKSRPFEYLRL...TSL..GVIGALVKNDSSEviNFLLTTEIIPLCLRIMETGS
273- 375 (137.05/82.05) LLDDNGLNyiCATYERFYAVGTVLsNMVGQLVEQQTARLLKHV...VRCFLRLSDNARAREALRQclpEPLrdATFSSVLRDDAAT..KRCLAQLLINLSDNIVDAGS
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