<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32992
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MAEDIPLILDDAMSGIAGMSGDVPVGLGDVDVDDVDLFGGPVDLSLPSHRPPSKQLQLRIDEQRIRGCNQRIAWSKQGTIASIGADGQSIELRYLRTDAEDASWALSEATSYAHFSSINTQTTFAGGPIVHLAWAATGHSELAVIDSVGRVSILAFSTSLNKPFALRSWEADPVDDLRAVVGCYWLPIVPANKQYNVIYGPAVREESGYRYETTLVHASGPYHPNPNKSALLCVTVSGTLRLLFSQNSNQVQDTSIELENITSSDDLTSHASICTDKNMLLIAMVTASRQLKVVRAAIGWNQSQQDKQAPLQSQQLNPMLQHKPTAVTTWLQHSGGESQLDISSDLVSHVEMLPSALSTGANHWSQPLVIVVREYLPTQSTASYNPEPQSIIDRWELVTESPPQPLHPAFEQLGFKPTQSTPQTGSQAHTRLNKLPPVTINKLIISIQNLHHGRVVCFFFSDGTLQYRDRFTFEEVFNEPNPARIASLQHASFQFSDPTPCLAAVLSPTNCSFAQVCEDGKVKWNNLKYTGPDLAPTGPDPNYTAIVAGLTTAVSTSSANIISYDDILATARQFINRPRFAYEWMMEIVRILKINVDYSEDAHHDQLVRNNSLHLCLSILNHLGFRGEFKPRSFYGKFSMLALNMRNIVILITISSNAPSNLKVNPLDEPDVVDALAGCAKWAVDFLAYTCDCIFNLLDDPKFQSFLTGNNFNEMVPYLLEKNEIALHLILCSSTRGFLSAACRRLLHLDSISSRATKFYEQQQQTPTGAANGNSSLRPALIMAYQKMQQYTSSSLIKVQEFDKLLWALGEDIRHTYQSTAAAQSGAAAKNRGQNQGQNQGQNQATDNAAKRFQAHCELTLLLANNPPAHFQPLLRKFFNTNVRQFRTLTDPAKLYFADYSILDVEDDNRSLQEKRARHTHIDVFKRVELKPTSSTSGASGSSAANAAGHPTTFPPHSAPSEYYRRCARCTSIMEDITGSRPGYTFVLAQQRKCSCSGNWGLLPRSAFVG |
Length | 1010 |
Position | Tail |
Organism | Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) (Rose-picker's disease fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Sordariomycetidae> Ophiostomatales> Ophiostomataceae> Sporothrix.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.266 |
Instability index | 43.08 |
Isoelectric point | 6.30 |
Molecular weight | 111525.54 |
Publications | PubMed=24855299
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP32992
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 246.57| 77| 299| 77| 157| 1
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77- 157 (117.92/95.10) QGTiASIGADGQSIELRYlRTDAEDASWALSEATSYAHFSSinTQTTFAGGPIVHLAW....AATGHSELAVIDSV..GRVSILAFS
379- 461 (128.65/87.92) QST.ASYNPEPQSIIDRW.ELVTESPPQPLHPAFEQLGFKP..TQSTPQTGSQAHTRLnklpPVTINKLIISIQNLhhGRVVCFFFS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 104.38| 33| 299| 597| 633| 2
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597- 633 (57.72/53.45) DYS.EDAHHDqlvrNNSLHLCLSILNHLG.F.RGEFKPRS
899- 934 (46.66/32.96) DYSiLDVEDD....NRSLQEKRARHTHIDvFkRVELKPTS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 253.00| 77| 494| 159| 240| 3
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159- 240 (134.11/117.30) SLNKPFALRSWEADPVDDLRAVVGC.YW...LPIVPANKQYNVIYGPAVRE.ESGYRYETTLvhasgPYHPNPNKSAL...LCVTVSGTL
655- 739 (118.89/91.46) SSNAPSNLKVNPLDEPDVVDALAGCaKWavdFLAYTCDCIFNLLDDPKFQSfLTGNNFNEMV.....PYLLEKNEIALhliLCSSTRGFL
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