<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32984

Description Uncharacterized protein
SequenceMATRLGSRGHLPSSLPPTPTQNPNSALPPINAHRFQPCPLDHVLRQHGLTRYRLEPPSWRPPWLPAGGAGSGSGPGGASTSSSSSSAAAAAAAASTSIYPQFYAPCDGQEEDQLTETAVKTGFGGKNVVQTETFSAHQLIYEKLKSEDILGNLSRLSNAVRDRAQQLVPTYGPPSFKLPKRNIVTDTKREQWFTDLSNPAVPLSKLFSIVPHGYRGQQILEMFYSKKVPFSRAIWFVRAFGALEIQNNIAKRPASAPSAVASYTLEWTLIVQEFVRKQLAEITTDEAPAASLTSPTTVTHPLRTSLSAKAQAKQPVMLDTNLRNVWTTKFSYTLRLLEALHEEHLLDSDSFLRFLVNQIDSSNIGQLPFALFLAEEYLGEFLLSEPLSARLIAACFARLDSLWSLTTPTSIYSATISTLTSLIQSTFVALPDAFIAAPLWSQYASSLTKLLDGLEDPVLMQMVRADMSDLKVRSEAASKGTEDEDSSEPDDNETIQLLDSIAFPTLLAQVHKSLFHKRRRKRGLQVELPLMFTWATCGDRAGPYRRYAAAALIAMEKQNMDMDEQPRVDIERVFIDWIDSGARTGGARKAGDEDAEIRLLLEELIRCNVIGYSSYLQRMIARGETEEASHPSKPWSSIHIKLLKSVALHDGSGRPLAKKRMALKVSSASRSESERLLEDATRELYRLVPSLVDGQSDPLAALLGDRDCTTLLGAISGLGKNGMHLVLQRDIIPVGLARLLRPKDEHMALTAEEHAILTQAYLSVEDYFGLLQYIFVVLIHAPTRDVLSCVLDLVEGNLDCWTALGALPTLGQALLIAHEGLKANGINDRRLIALLRQFGRAQCLDATNLIKLEQDYQELVLSLSSSRPQQQSLPAGFPELQGLLIDSSPQAIAQLGTTLWYRYHAFENWAVIAIESGVQLLAGVSASTIVRFLREINERLPTGLEAQIGKWIAQMPSYSMIATFGAHLSSGVAILLLELVTGGILSPSALITLVILPVWRTLLNAASSPTSPVSHASVQAPSLDANLLQALDTITHIFGSLITRFSHAFGGPASTEDLSNTPAALLQRQRGDSRCASLFTQASLAELGKCVASLAVQQDFWTTLGQHERAQTTGMLLVHLNSWPAFQTAVVRDPQVFASAVLDTAAVGAAPLATNSHRPKLLAALLLTLKDSSTAIPASLVSTEDWDIFLSGLTTWRLAVSKVEVQACLERLDLDNTISDAEKAEGLTTLSRHFLDRVCSGEGHTYLGEQIVKCYHGHASDQLVSVAFSRLAEAVDGLARTASIERRTHSLTTLRCTGRLLNTLLQSSSASSQPTPLHQLLTAIRCCLEGLVDEGVSSSREAILHSAHLLAIALRCSTTVSPAATETVDLFKGCLIPCAKLAAISCRDCPNDVELSSVLLDTCSHLLFGLTDSAPSLRLPSIESIIAPEVELDSLPQAGQLRLGRLFDAAGSTLPVANPWDLVDHADPGPPQTTRHNSGPLDLAWFDAKIVTVIPPLTAMDVHNGPASSGTTANGNRFAVAATPFSTAAAHVHAITGHQATFERGRQSNFDFETPCIAMSVAARDHRRTLMAAKAQLSKYDPNNTGSAALHDTAAHSPAAGALSGPAAAPLASTAISPSAQAKKREETLAALASASATISAKRKDPPEVVVIDSDEEDEPIAQIVAAKAPAAKRGRPSNRDAAAAARKKAKT
Length1692
PositionKinase
OrganismMicrobotryum lychnidis-dioicae (strain p1A1 Lamole / MvSl-1064) (Anther smut fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina> Microbotryomycetes> Microbotryales> Microbotryaceae> Microbotryum.
Aromaticity0.06
Grand average of hydropathy-0.042
Instability index45.36
Isoelectric point6.19
Molecular weight182566.82
Publications
PubMed=26076695

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32984
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     797.67|     215|     242|    1015|    1236|       1
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 1015- 1178 (240.82/112.90)	.................................................................................HA.SVQAPSLD.ANLLQALDTITHIFGSLITRFSHAFGGPASTEDLSN........TP....AALLQRQRGDSRCASLFTQASLAELGKCVASLAVQQDFWTTLGQHERAQTTGMLLVHLNSWPAFQTAVVRDPQVFASAVLDTAAVGAAPLATNSHRPKLLA....ALLLT.......LKDS..STAIPA
 1179- 1421 (271.99/143.29)	SLVSTEdwdIFLSGL.TTWRLAVSKVeVQACLERLDLDNTISDAEKAE.GLTTLSRHfldrvcsgeghtylgeqivkcyhgHA.SDQLVSVAfSRLAEAVDGLART..ASIERRTHSLTTLRCTGRLLN........T.......LLQSSSASSQPTPL..HQLLTAIRCCLEGLV...DEGVSSSREAILHSAHLLAIALRCSTTVSPAATETVDLFKGCLIPCAKLAAISCRDCPNDVELSS....VLLDTcshllfgLTDSapSLRLPS
 1424- 1641 (284.85/136.59)	SIIAPE...VELDSLpQAGQLRLGRL.FDAAGSTLPVANPWDLVDHADpGPPQTTRH..........................nS..GP.LD.LAWFDA..KIVTVIPPLTAMDVH..NGPASSGTTANgnrfavaaTPfstaAAHVHAITGHQATFERGRQSNFDFETPCIAMSVAARDHRRTL.MAAKAQLSKYDPNNTGS.AALHDTAAHSP...AAGALSGPA..AAPLASTAISPSAQAkkreETLAA.......LASA..SATISA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     159.09|      45|     277|      16|      66|       2
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   16-   66 (80.86/58.46)	PPTPTQNPNSALPPiNAHRFQPCPLDHVLRQHGLTRYrleppSWRPPWLPA
  295-  339 (78.23/42.55)	PTTVTHPLRTSLSA.KAQAKQPVMLDTNLRNVWTTKF.....SYTLRLLEA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.87|      34|     276|     445|     505|       5
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  451-  485 (53.95/69.29)	LDGLEDP.VLMQMVRADMSDLKVRSEAASKGTeDED
  560-  594 (57.92/20.88)	MDMDEQPrVDIERVFIDWIDSGARTGGARKAG.DED
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.04|      16|      17|     391|     406|      13
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  391-  406 (27.81/16.75)	LIAACFARLDSLWSLT
  411-  426 (25.23/14.48)	IYSATISTLTSLIQST
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.33|      30|      39|     909|     943|      14
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  909-  943 (37.82/33.50)	WavIAIESGVQLLA..GVSASTIVRFLreINErLPTG
  951-  982 (48.51/25.67)	W..IAQMPSYSMIAtfGAHLSSGVAIL..LLE.LVTG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.38|      17|      91|     704|     720|      18
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  704-  720 (32.65/19.95)	GDRDCTTLLGAISGLGK
  796-  812 (33.73/20.87)	GNLDCWTALGALPTLGQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32984 with Med12 domain of Kingdom Fungi
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