<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32973

Description Uncharacterized protein
SequenceMAANFYLSSHANYHLHPRSALLAARVDDLRHATEQEIAWVEIWSGSVIQKLCKRLGLRQQVIATAIVYFRRFYLRNAYCDTDCALVAAACCYVAAKAEETPVHVKSAVAEAKMVFHDMGLAFPSDNTKLAEMEFYLIEELDFHLIVFHPYRSLVQLCGRDGGPSAGGEQGRLNRQAMLEMDEPALQMAWFIINDTFRSSLCLVHPPHLIALAAIYLAFSLHPPSSVVKETASTNLKDPSISGPASRTRRRSTDVAPSAAPRAHATTSSTVATTVPTVGGRTDAITFLASLQVDHSLILEIVQDVISLYELWNQLEASAQATSPSSTGSQGGPSAAPVSRISIGGGAGRTTSVSADEKVVIILARMMKDRHRELQSEKGGRGATGWKK
Length387
PositionKinase
OrganismMicrobotryum lychnidis-dioicae (strain p1A1 Lamole / MvSl-1064) (Anther smut fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina> Microbotryomycetes> Microbotryales> Microbotryaceae> Microbotryum.
Aromaticity0.07
Grand average of hydropathy-0.043
Instability index52.02
Isoelectric point7.70
Molecular weight42073.56
Publications
PubMed=26076695

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
cyclin-dependent protein serine/threonine kinase regulator activity	GO:0016538	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32973
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     245.47|      69|      73|     188|     260|       1
---------------------------------------------------------------------------
  147-  186 (44.81/21.85)	................................FHPYRS....LVQLCGRD.G..GP.SAGGEQGRLNRQAMlEMDEPALQ
  188-  260 (107.71/76.03)	AWFIINDTFRSSLCLVHPPhliALAAIYLAfSLHPPSS....VVKETAST.NLKDP.SISGPASRTRRRST.DVAPSAAP
  262-  336 (92.96/54.68)	AHATTSSTVATTVPTVGGR...TDAITFLA.SLQVDHSlileIVQDVISLyELWNQlEASAQATSPSSTGS.QGGPSAAP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32973 with CycC domain of Kingdom Fungi
Unable to open file!