<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32970

Description Uncharacterized protein
SequenceMVNLVEPNPPSTSFRPRVTPTTLIARWPTANAQSTVPLLARTITANLSGIATGRRALQIRPFRMAAPSTLSTGKGAGAGAGAGAGAGAGASAGANTESSRNMWVLRTLGTADDKVFVWVNDPTQPTRRSMTTGRAQFIDKIKRNEGDDTTMDESDQEDEDEKDDSLGLETTPRHTRWTFNSLGVATNMSSSPLHVSPFDAFLQRVLLSSSSMSASSSAASIGQPITTGSPSLPSGAVHWTPRPTAVSLDGFTFSVGGPNGTGDWEVKIATVGLKGGASVGSSKGVVVEITYLPVPYLSPNSTFIRDFGSTLFPTQALATGEIDFYEPDHEQIYEAGLVSTEQDKRGEWEWSDKHSAWAYLQLFRKEGML
Length369
PositionHead
OrganismMicrobotryum lychnidis-dioicae (strain p1A1 Lamole / MvSl-1064) (Anther smut fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina> Microbotryomycetes> Microbotryales> Microbotryaceae> Microbotryum.
Aromaticity0.08
Grand average of hydropathy-0.334
Instability index41.93
Isoelectric point5.48
Molecular weight39344.34
Publications
PubMed=26076695

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32970
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.29|      10|      15|     139|     148|       2
---------------------------------------------------------------------------
  139-  148 (17.62/13.68)	DKIKRNEGDD
  155-  164 (17.68/13.75)	DQEDEDEKDD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.91|      13|      16|     188|     200|       3
---------------------------------------------------------------------------
  188-  200 (24.36/16.00)	MSSSPLHVSPFDA
  207-  219 (20.55/12.38)	LSSSSMSASSSAA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32970 with Med20 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FVWVNDPTQPTRRSMTTGRAQFIDKIKRNEGDDTTMDESDQEDEDEKDDSLGLETTPR
2) PFRMAAPSTLSTGKGAGAGAGAGAGAGAGASAGANTESSRNMWV
116
61
173
104










Molecular Recognition Features






MoRF SequenceStartStop




1) RALQIR
55
60