<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32945
Description |
Mediator of RNA polymerase II transcription subunit 16 (Fragment) |
Sequence | TQSNIEENSSFFSSNVYVADLNTPWQVHKILCNSAPVTVLQWDFTGKLLLIGDENGCTRIYTTPDHILNDWQLYLEVPLEGEHILAAAFFHPGKKICLNTEKKDSSCYFDKFSHVKFACSVKQFGGRPSSGVLLLTTTGMLAAVLLPQTTTQTPMVMATECLGPSRGFIKNADICYGKNGHFLIAVSSGDPSMPVQCYTVSVKKIDDKCIITSQTLLAFFLFEAPKEALKQVIKDKNCTISHIKWIMREDADSIVVAANSNNQSCLQVWELREKPLPVHKSFGNTESSQFFNRVVWQYQCHFQYSSKVTALEINKLSLINSVSSGYIVVTFSDNTVHCLYRDTLKPIASTSLAIARQLEEPLSKVPRLNTKIASIDLSWLGNVLLIMDSDDNLHLLKLPPQIESTALSVPYFTTVLEYCLIGGFDWLDLMLVLRPSMIEAVCDRLTESFNRQPGFVQQFFYIQLLCIKVSLYRLSANGQSKANDLSSFLMLHSISIAFKSLLRPSEMNTPEKSPAESLAAEAEGQTDVDKVLMNLEAKEFTIEPSTLQSLQQLIQWIADLALNLLVKVPDSRPSIGKPYELIKDVKALNMLKEMLVLIRIWGLLRPACLPVFIRSDANMDVLALLFRLLSRLVQNVNEPDDALVDDCCLLPSQVQVQQMQAFSNRTVLASPQFSQLILPLQLEFNVEPECLTAPGDVSSNQTIDSIRHLYLGKNPRVVKQCVRCGNSAGTTPLARTAAIRAWDQRWSRSCQ |
Length | 751 |
Position | Tail |
Organism | Dendroctonus ponderosae (Mountain pine beetle) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Coleoptera> Polyphaga> Cucujiformia>
Curculionidae> Scolytinae> Dendroctonus.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.026 |
Instability index | 45.22 |
Isoelectric point | 6.26 |
Molecular weight | 84011.21 |
Publications | PubMed=23537049
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP32945
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 90.80| 26| 249| 373| 442| 1
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40- 67 (44.14/ 9.41) LQWdfTGKLLLIGDENGCTRIYTTPDHI
377- 402 (46.66/82.51) LSW..LGNVLLIMDSDDNLHLLKLPPQI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 75.43| 23| 484| 2| 24| 2
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2- 24 (41.32/20.61) QSNIEENSSF.........FSSNVYVADLNTP
479- 510 (34.11/16.07) QSKANDLSSFlmlhsisiaFKSLLRPSEMNTP
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