<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32909

Description Uncharacterized protein
SequenceMPRISLFQQVGAQENQKYFTSLGTFSVRRSYAGPCTFSFCLSCLGTVMNSHSGAMSCAAVAVTALPVSLPLAGGPRLDTSYRPVRMPLGKLVQSRPPYSGVLPPGMGSMMGIDPSYKPAVYRQQPPVSQGQILRQQLQAKLQGQGIMGQQPVRQMAPTPSYGALQPSQGYTPYVSHIGLQQHPSQSGTMVPPTYSGQPYQNSHPSSNPALVDPVRQMQQRPSGYVHQQAPGYGHTLGNTQRFPHQSIQQTPMMSGMNHLGPQGVPSGIRPSQILPDQQQQQYLRQQQQQQMLRQQAAMRGTCHSPQ
Length306
PositionKinase
OrganismFicedula albicollis (Collared flycatcher) (Muscicapa albicollis)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Archelosauria> Archosauria> Dinosauria> Saurischia> Theropoda> Coelurosauria> Aves> Neognathae> Passeriformes> Muscicapidae> Ficedula.
Aromaticity0.07
Grand average of hydropathy-0.554
Instability index72.28
Isoelectric point10.11
Molecular weight33393.71
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
beta-catenin binding	GO:0008013	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32909
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.34|      15|      15|      84|      98|       1
---------------------------------------------------------------------------
   67-   81 (25.07/ 8.96)	VSLP.LAGGPRLDTSY
   84-   98 (26.72/ 9.96)	VRMP.LGKLVQSRPPY
  101-  116 (24.55/ 8.64)	VLPPgMGSMMGIDPSY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.56|      14|      20|     166|     184|       2
---------------------------------------------------------------------------
  166-  184 (22.89/14.12)	PsqgytPYVSHIGLQ.QHPS
  191-  205 (23.68/ 6.15)	P.....PTYSGQPYQnSHPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.55|      19|      66|     215|     233|       5
---------------------------------------------------------------------------
  215-  233 (37.55/13.47)	RQM...QQRPSGYVHQQAPGYG
  279-  300 (25.99/ 7.20)	QQQylrQQQQQQMLRQQAAMRG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      52.15|      10|      22|     234|     243|       6
---------------------------------------------------------------------------
  234-  243 (19.35/ 8.52)	HTLGNTQRFP
  258-  265 (16.49/ 6.20)	H.LG.PQGVP
  266-  275 (16.31/ 6.06)	SGIRPSQILP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32909 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PYVSHIGLQQHPSQSGTMVPPTYSGQPYQNSHPSSNPALVDPVRQMQQRPSGYVHQQAPGYGHTLGNTQRFPHQSIQQTPMMSGMNHLGPQGVPSGIRPSQILPDQQQQQYLRQQQQQQMLRQQAAMRGTCHSPQ
2) QAKLQGQGIMGQQPVRQMAPTPSYGALQPS
172
138
306
167










Molecular Recognition Features






MoRF SequenceStartStop




1) IRPSQILPD
268
276