<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32903
Description |
Transcription elongation factor A1 |
Sequence | MKLTSVNLSDKAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDSEEKKKEPASSSQNSPEAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPSTSDSVRVKCREMLSAALRTGDDYIAIGADEEELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC |
Length | 292 |
Position | Unknown |
Organism | Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Archelosauria> Archosauria> Dinosauria> Saurischia> Theropoda>
Coelurosauria> Aves> Neognathae> Passeriformes> Muscicapidae> Ficedula.
|
Aromaticity | 0.04 |
Grand average of hydropathy | -0.797 |
Instability index | 51.95 |
Isoelectric point | 8.66 |
Molecular weight | 32482.45 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | nucleolus GO:0005730 IEA:Ensembl
transcription factor TFIID complex GO:0005669 IEA:Ensembl
|
GO - Biological Function | nucleic acid binding GO:0003676 IEA:InterPro
zinc ion binding GO:0008270 IEA:InterPro
|
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro
transcription, DNA-templated GO:0006351 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP32903
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.15| 22| 27| 75| 101| 1
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68- 90 (32.00/15.48) DGPSTDKDSEEKKKEPASSSqNS
95- 116 (36.15/23.21) EESSSSSNSSSRKEEGSAPS.NS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 83.08| 26| 49| 175| 204| 2
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175- 200 (41.14/32.21) DMKYKNRVRSRIANLKDAKNPNLRKN
205- 230 (41.94/21.84) NIPPDKFAKMTAEEMASDELKEMRKN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 53.45| 14| 27| 249| 262| 3
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249- 262 (28.18/16.09) TDLFTCGKC..KKKNC
277- 292 (25.27/13.82) TTFVVCNECgnRWKFC
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