<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32829

Description Uncharacterized protein
SequenceTRAKLREAESSRKENEERERLDAEEADYRSWSNELFYTRRYQEAAAHYTEAVNKNPNEPAVFRNRAQCHIFLGALPQGLEDAEKCIELDPTYLMGYLCKAKVQALMQNYQSAMATYIEGLKRDPNSTIIIDGFKRCVTCIEKFKGGDVGIVDLEDILGDWHSDIYLSNELQKYMEEVAVLKTEASDERLRRMESEQTARTSEANQVQRQKETEEHLSKIQQELQQVKARQDEVANELLKANKHNEHAQNQLLESKKFHSEELQKANEHSLNLQHQLTESKERCNQLQSKHDVLLKERDTALKEVEKLRRRSTAMPCQFSLAELECATENFSTSMKFIECGVASTYQDVLRNMKVAIKVLRHDGQGHSQFEQEVAIHSRVRHPNLVTLLGACKESSTLVYESLPNGSLEDFLSCEDKRQTLTWQMRVRIIAEICSALIFLHENKPDPIVHGDLKPANILLDANLVSKLSDFGISHLLIQSKSKNSDHPVEDPTYMDPEYLATRKMTPHCDVYSFGMVVLRLLTGQPPVGIKKIVEDAMKQGDLNSVVDTSAGEWPDVHIQQLAHIALSCTEQNSRYRPVLSGQLWTAVETMRDVAMLSSQSSSSLVPEESIIPSHFTCSISHVKIMKDPQLTADGIAYEGNSIREWFGRGKITSPFTNLPLQHQELIPNIALRSAIQEWLQQHSMVL
Length686
PositionTail
OrganismTriticum urartu (Red wild einkorn) (Crithodium urartu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.541
Instability index52.67
Isoelectric point5.73
Molecular weight78126.58
Publications
PubMed=23535596

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32829
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.95|      30|      66|      39|      68|       1
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   39-   68 (54.88/39.39)	RRYQEAAAHYTEAVNKNPNEPAV...FRNRAQC
  107-  139 (50.06/35.30)	QNYQSAMATYIEGLKRDPNSTIIidgFKRCVTC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     137.51|      48|      64|     168|     231|       2
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  168-  220 (69.05/66.69)	NELQKYMEEvavlKTEASDERL..RRMESE..QTARTSEANqVQRQ.KETEEHLSKIQ
  235-  287 (68.46/34.70)	NELLKANKH....NEHAQNQLLesKKFHSEelQKANEHSLN.LQHQlTESKERCNQLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.43|      21|     392|      80|     101|       3
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   80-  101 (35.63/36.34)	EDAEKCIElDPTYL.MGYLCKAK
  482-  503 (35.80/30.10)	KNSDHPVE.DPTYMdPEYLATRK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.77|      23|     392|     141|     166|       4
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  141-  166 (32.70/29.32)	EKFKGGDV.GIVDLEdiLGDWhSDIYL
  535-  558 (38.07/21.99)	DAMKQGDLnSVVDTS..AGEW.PDVHI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32829 with Med32 domain of Kingdom Viridiplantae
Unable to open file!