<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32825

Description Uncharacterized protein
SequenceRVMSSPDVPTAVLKTTQNACNVFVVCKRRLIVKVAGHPQAGMSGTNLSIHSITHKAFAETQMSLLSDSSTEAETLSVSSGSQARCSYSASSDASAGSESSVLVHIVSGDALQAGTDVNQRYDSHSLLKKVSYGASNSSDECQSIDEVEKLRKELKETLVMYDKACDDLVHAKKKIQVLSNECSEEARKVENALRKEKILKQLAADEKAKHLEAINEVEQAKRSFTREAYSKHKAEMVGCIISLDKEKIVDAILSTSKNCRRYSKHEIELATGNFSEARKIGEGGYGNVYRCTLDHIEVAVKIIRQDSTDKTDEFLKEVEILSQLHHPNLVLLIGFCPEIGCLVYEYLENGSLEDQLLNNKRHQPLHWFLRFRIIFEVSCGLAFLHGRKPEPIVHRDLKPANILLDKNYVGKIGDAGFAKVISDLVPDWQTEYTDTIVAGTMYYMDPEYQQTGTVRPKSDLFGLGVIILQMLTGKHPNGLIVSVENAIKSRSLPYILDRTQTDWPVAEAEMLAKLGLRCTALKCRDRPDLESEVLPELEEILHRVSSIVNMRNPNSRAPGHFICPITQGLMDDPYVAADGHTYEHHAIKDWLRKHKVSPITRCKLPNLSIIPNHSLHAAIQQWKKSQTAQ
Length629
PositionTail
OrganismTriticum urartu (Red wild einkorn) (Crithodium urartu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.339
Instability index41.72
Isoelectric point6.83
Molecular weight70233.44
Publications
PubMed=23535596

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32825
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.28|      13|      49|     542|     554|       1
---------------------------------------------------------------------------
  542-  554 (24.69/19.00)	HRVSSIVNMRNPN
  594-  606 (25.59/19.97)	HKVSPITRCKLPN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.35|      33|      48|     128|     173|       2
---------------------------------------------------------------------------
  138-  173 (49.99/59.99)	SDECQsiDEVEK....LRKE..LKEtLVMYDK.....ACDDLVHAKK
  179-  222 (39.36/18.32)	SNECS..EEARKvenaLRKEkiLKQ.LAADEKakhleAINEVEQAKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.12|      19|      30|     229|     258|       4
---------------------------------------------------------------------------
  229-  248 (30.04/35.98)	YSKHKAEMVGCIISlDKEKI
  262-  280 (33.08/13.64)	YSKHEIELATGNFS.EARKI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.56|      22|     358|      52|      75|       6
---------------------------------------------------------------------------
   52-   73 (35.42/29.21)	ITHKAFAETQMSLLSDSSTEAE
   77-   98 (36.14/22.22)	VSSGSQARCSYSASSDASAGSE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32825 with Med32 domain of Kingdom Viridiplantae
Unable to open file!